Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139416318
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Entry
139416318 CDS
T10872
Name
(RefSeq) methyl-CpG-binding domain protein 5-like
KO
K26585
methyl-CpG-binding domain protein 6
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03083
Polycomb repressive complex
Brite
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
139416318
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139416318
NCBI-ProteinID:
XP_071020923
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All DBs
Position
9:complement(41671149..41684097)
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AA seq
1529 aa
AA seq
DB search
MMGGSESGSGDTDGVHTVAIQVPIGWQRRVDDGLVVYVSPSGTFLSSLEEVKSYLLTDGT
CKCGLECPLVIHKVFNFSLGVKVQQRSQLVGKAEQDMTKLCNHRRKVVAMAALCRSMQAS
QLPYVSCHTEVTSAIMENRDPKRMRVDREEEERGTYPSKHPPVHSRPNNNLNHNPCGSPK
YSTQLVYSYNGSSPLSHASTNSHHSPEILKRLPPPLHFPPTTSQFSSYGAPQRSPCTPTS
HNFSQGQRTPQTPEAPRSPHLGPLSPLPPSSPGTLGRGGQSHPHGIIIGSLLSPSCSPSP
RQRSRHPSASSSISEQEVGGVVLGGYPPRRISSSSPHSPLPGGSPNLHFPKYKLEDILEQ
FRNSGNGSTNNHILNTNSLSNQSNPQILSLALEKGEKPTKAPASATGSGMGISAGPSGLP
LGQFLNHQKQPHTASFPASSLLSAAAKAQLASQMAHDHSSNSASVLSSATSLEVSKESRQ
SKVTNSTLHNNSHPSITRPLPAASRLLLHPCATLSQPLASSPLHLSPTDRTSHRKRQRRS
PTVLSMLKDSQVSGLRTPGDVLNLSALHSQPSSTSGSSHSATSENHLQGLRLSVRHSCPL
TGPQKQPDGALDFTTIMAGQPDPPTQPLSALLHLLSMQNAQAAGTQPGSGHGTGGTRQSP
RQSPSPSHLNIRPFPMQSPSHPCTMQGLSQPLSPTQSLSRLGSASAQSPHTKASPKQRRS
PSTALSNTQSAHHRSSPSPTRHTPDRLRQAQNQPMDAATTTLQSPMCQTLPDVSASVEIE
SVSTLGPGLSLGHPPNNIPTSNHSTTSPRPLDLSNHVLALLAASSTTPLEEGGLDTTTGN
NTAGVQEPESVDHRSSTVSKTPGGCSPGPCNTPSLGDSPGSLPLAEAFPFMSQEQLLQLL
SATAGLPSLLDPTILGSLPLGLWLGGQQCHLPTSNTSQQHHQLPDHHHHQQQSEHQQLLL
QHEQHQEQHQKQQQTAHLNHNFPFSLLPSLMGGQGELPLNLLGLLNPLLPPSATLTPGQE
GDLGIGEKLGLQALLMASLLLGQQQAAMLPLSGLGQLSLDLPLQQQHIPALLEGLSLDKG
SGLLDLSSLPGPGLLEALQGLLPPAEGPLQALQSLLLPAPLPPPGFLSLNPTLLNAALGS
TDLPTTPQLPPPQQPPPQVSASGPDGGVDTLIPLSVQGKDNPVLHQLLPTLLNPGLLGDL
SALTSLHSLLGLGAGPLLLPPVQTSALGMPLLQGPDGAINLLNNIQLNMAPPSEGEKPTS
LQEKDSPAPQKDIPANQLTPEAAPSPCPVRTPVSQRGEGSVGSVLDPYASFMDTIYTSFL
QVSAKEQEAAQTGADVLCALPPSYPGEPPAPSAPLSLSPRLACSLRNPELSRLNLEAAHS
PAQGTPKPSNDGLSTPLQSKPGVPEGHTNPPLPPIYLEEAKTESYSQAVTDRNGDRPQAG
GYLSPRDRGSCPKEETVGLQHIEQGRNLTAQTAGARRGRKRKQTLQNVLEDFRDLDAPAL
EEPKPTVVLLKPERSVRGRRRRGARSQRQ
NT seq
4590 nt
NT seq
+upstream
nt +downstream
nt
atgatgggaggcagtgagagtggcagtggagacacggatggagttcacactgtggcaata
caagtccccattggctggcagaggagagtggatgacgggcttgtggtgtatgtcagtcca
agtggcacattcctgtcttcactggaagaggttaagtcttatctgttgaccgatggcaca
tgcaagtgtggcctggaatgtccgctggtcatccacaaggtgtttaactttagcctaggg
gtcaaagttcagcagcgcagccagctggtggggaaggcagagcaggacatgacaaagctc
tgtaaccatcgaaggaaagtggttgccatggcagcgctctgtcgcagtatgcaggcttca
cagctgccctatgtttcctgtcacacagaggtcaccagtgccattatggagaaccgagat
ccaaagaggatgagagtggacagggaagaagaagaacgtggcacttatccctctaaacac
cctccagtccactccaggcccaacaataatctcaaccacaacccttgtggcagtcctaaa
tattccacccaacttgtgtattcttacaatggttcctcacccctctcacatgctagcact
aactctcatcactctcctgagattctgaagagactgccccctcctctccatttccctccc
accacctctcaattctccagctatggggcacctcagaggtccccatgcacccccacgtct
cacaacttcagtcagggtcagaggacaccccagactccggaagcccccagatctcctcat
ttggggcccctctctccccttcctccctcctcccctgggacactgggaaggggagggcag
agccatccacatggtatcatcattgggtctctcctgtccccctcatgttccccctctccc
cgccagcgctcacgccacccctccgcctcttcttcgatttctgaacaggaggtgggaggg
gtggtgctgggcggctacccccccagaaggatatcctcttcttccccacactctcctcta
cccggggggtcccctaacctccatttccccaaatacaagctcgaggacatcttagagcag
tttaggaactcaggcaacggtagcactaataatcacatccttaacacaaactcactgagc
aaccaaagcaatcctcagatcctctctctagctcttgaaaagggtgagaagcccacaaag
gcacctgcttctgccaccggctcaggcatggggatcagtgctggtccttctgggttgcct
cttggacagttcttgaaccaccagaagcaaccacacacagcctcgtttcctgccagtagc
ctcctctcggcagcagctaaggctcagctggccagccagatggcccacgaccacagttcc
aattcagccagcgtcctcagctcggccacctctctggaggtctcgaaagagtcccggcag
tcaaaggtaacaaacagcactttacacaacaacagccatccctccatcactaggcccctc
cctgcagcctcccgcctgctcctccacccctgcgccaccctctctcagcccctagcctcg
agtcccctgcacctctcccctacagaccggacgtcccacaggaagcggcagcggcgttcg
cccacggtgctcagcatgctgaaggactcccaggtgagcggtctcagaacccccggtgac
gtgctcaacctctccgccttgcactctcaaccctcctctacctcaggctcgtcccactct
gccacgtcggagaaccacctccagggtctgaggctctcagtccgacactcctgcccgctc
acaggtcctcagaagcagcctgacggcgccctggacttcactacaatcatggcaggtcaa
ccggatccccccacccagcctctctccgctctgcttcacctgctcagtatgcagaacgcc
caagccgccggaacccagcccggctctggacacggtacaggaggcacgaggcagagcccc
aggcagtctccctctccctcccatttaaacattagaccattccccatgcagtccccctct
catccctgtaccatgcaaggcctgtcacagcccctgtctcccactcagtcattgtccagg
cttggtagtgctagtgcacagtctccacatacgaaggccagtcccaaacagagacggtct
ccctccacggccctgtccaacactcagtcagcacaccatcgcagtagcccctcgcccacc
cgacacacccctgataggctacggcaggcccaaaaccaacctatggatgccgccaccacc
accttacagtctcccatgtgccagaccttgcctgacgtcagtgcatcagtggagattgag
agcgtatcaacactaggccctggtctcagcctgggtcatcctcccaacaacatccccacc
tccaaccatagcaccacctcccccagacccctggatcttagtaaccacgtgctggccctg
ctggcagcctcctccaccacgcctctggaggaagggggcctggacacaaccaccggcaac
aacactgcaggggtgcaagagcctgagagtgttgatcatcgtagctcgacagtgagcaaa
accccaggaggttgcagccccggcccctgcaacaccccttccctaggggactcccccggc
tccttacccttggccgaagccttccccttcatgagccaggagcagctcctccagcttctg
tctgccacagccggcctgccctccctcttggatcccaccatcctgggctccctgcccctg
ggcctgtggctgggtggtcagcagtgtcacctccccacctctaacacctcacagcaacac
catcaactgcctgatcatcatcatcatcaacaacaatcggaacaccaacaactactgtta
cagcacgaacaacaccaagagcaacaccagaaacaacaacagactgcccatctgaaccac
aactttccgtttagcctactcccctctctaatgggaggtcagggagagctgcctctcaat
ctcctgggtctgttgaacccacttctacccccctctgccacccttaccccaggccaggag
ggtgatctgggtataggggagaaactgggcctccaggctctccttatggcctccctgctc
cttggccaacagcaggctgccatgttgcccctgtctgggctgggccagctgagcctggac
ctccccctgcagcagcagcacatcccagccttgttggagggtttgtctctggataaaggc
tctggactcctggacctatcgtccctccccggccctgggctccttgaggccctccagggc
ctgctgcccccagccgaggggcccctccaggccctgcagtcgctcctgctccccgctcct
ctccctcccccgggcttcctctccctcaaccccactctgctaaacgctgccctgggctct
actgacctcccgaccacccctcagctccccccaccccaacaacccccacctcaggtctcc
gcttcaggccctgatgggggggtggacaccctcatccccctgtctgtccaggggaaggac
aaccctgttctccaccagttactgcccactctcctcaacccaggcctactaggagacctg
tctgctctgactagcctccacagtctgctggggctaggtgcaggccctctcctcctcccc
cccgtacagacctctgcccttggcatgcctctactccagggccctgatggggccatcaac
ctcctcaacaacatccagctcaacatggcgccgccctccgagggagaaaagccaacttcc
ttacaggaaaaagacagccccgcccctcagaaggatattccagccaatcagcttaccccg
gaggctgcgcccagcccctgtcccgtccgtacccccgtgtcccaacgtggtgagggctcc
gtggggagcgtcctggacccctatgcctccttcatggacaccatctacacctctttcctc
caggtcagtgctaaagagcaagaagcagctcagactggggccgatgtcctctgtgcctta
cccccctcctaccctggggagccccctgccccctccgcccccctgtccctgagccctcgc
ctggcctgctccctgaggaacccggaactgtcccggctcaacttggaggcggcccactcc
ccggctcagggcacccccaaacccagcaacgacggcttgtccacacccctgcagagcaag
ccaggggtcccagagggccacactaacccccctctgcctcccatctaccttgaggaagcc
aagaccgagtcgtacagccaggctgtcacagataggaatggggacagaccccaggcaggg
gggtacctgagccccagagatcggggcagctgccccaaggaggagaccgtgggtctgcag
cacattgagcagggcaggaacctaactgcccaaacggcgggagccaggaggggcaggaag
agaaaacaaacgctacagaatgtgctggaggatttccgagatctggatgctccagccctg
gaggaacctaaacccacggtggtgctgctgaagcctgagaggtcggtccggggcaggagg
cggcggggggccaggtcccagagacagtga
DBGET
integrated database retrieval system
