Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139416354
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Entry
139416354 CDS
T10872
Name
(RefSeq) DNA repair protein complementing XP-C cells
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03420
Nucleotide excision repair
Brite
DNA repair and recombination proteins [BR:
ocla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
139416354
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NCBI-GeneID:
139416354
NCBI-ProteinID:
XP_071020983
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Position
9:complement(42892072..42902516)
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AA seq
896 aa
AA seq
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MAKRKESADTAVKTDTKKPKKVAKGKAGGPRAKKENGEETEKVQRKAKHKSRLSKPIVGD
TAETNTSKYFQNETPVKEEPADMSPETDLIPPFIRARKDTVKPVKEEEDSEEDEDWEEVE
ELSEPLGPVEPALPSQPVEIEIETPDIIHKRQKREKRKAEFETYLRRMMNRFNKDVVEDT
HKVHLMCLLANGMFRNRLCSTPDLLAISLSLMPTHFTMVAKERIDTNYLSGLLKWFGATF
TLNPELPCEERPDPQALLERRLGSLTARDHQEMTHLFLLVLRSLQLFCRLVLSLQPLSLK
PPSAKSKAKNSGSPPRKSPSQKKPPKESPSEPKVSPGSKRPSGGKAERGGKKAKKKEAGE
TEKAVSVGQKPKNSKRRSIASKVSYKEESSEGEGPSDGEEFQLTNEEDSEDSEGGAKAIR
AKKVKGGKSRSTAPQKISSGGKKKVKSEEEDDDWEGNEKEGEEEQGMKRGKRKEGKGADE
WLEVYLEKTGCWVCVEVLQGVGQPQLCSKQATHPMTYVVAVDGDGHLKDLGSKYDPTWMT
STRKRRVDEEWWEVTLEPFLGPESERDVQEDKELQAKLLDKPLPTSIAEFKNHPLYALKR
HLLKYEALYPSTAAILGYCRGEPVYSRDCIHTLHSRDTWLKEARTVRLGEEPCKMVRGFS
NRSRKVRMASEQKDKDDLALFGEWQTEEYQPPVAVDGRVPRNDFGNVYLFKPCMQPVGCV
HLRLPNLQRVAKKLDMDCAAAVTGFDFHGGYSHAVTDGYIVCEEHEEILRAAWAEDQEIQ
RQKEKEKREKRAVANWTLLVKSLLIRERLQRRYGKKGPTPAGGLDQLKSQDREGVEGLSS
DEEGEGGPNTASAALAQAWPQNRQGEQDTGTGGASKTTSKRQKRGQEKHLFPFEKV
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcgtaaagagtctgcagacacagcagtgaagaccgacacaaagaagccgaag
aaggttgcaaaaggcaaagctggaggaccaagagccaaaaaagagaatggagaggaaacg
gagaaggttcagagaaaagccaagcacaaatcccgtctctctaaacctatagtaggggac
acagccgaaaccaacaccagcaaatacttccagaacgagactccagtgaaggaggagcct
gctgatatgagtcctgagactgatctcatccctccttttatcagagccagaaaagacaca
gtaaagcctgtgaaagaagaagaggacagcgaggaggatgaagactgggaggaagtggaa
gagctgtctgagcccttaggtccagtagagccagccctgccctcacagcccgtggagata
gagattgagaccccagacatcatccacaagaggcagaaaagggagaagaggaaggcggag
tttgagacctatttgcgacgcatgatgaaccgcttcaacaaagatgtggtggaggacaca
cacaaggtccacctcatgtgtcttctagccaatgggatgttccggaaccggttgtgtagc
acaccggacctgctggccatcagcctgtctctgatgcccacccactttaccatggtggcc
aaggaacgcatcgacaccaactacctctctggcctgctcaagtggtttggggcgacgttc
acgcttaacccggagcttccctgtgaggagaggcccgacccacaggccctgctggagagg
aggctgggcagcctcaccgctagagaccaccaggaaatgacacatctgttcctattggtg
ctgaggtcgttgcagctcttctgtcgactggtgctctctctgcagcccctgtcactgaag
cccccgtcagccaagagcaaggccaagaactcaggcagcccgcctaggaagagtccatcg
cagaagaaacctccaaaagagagcccctcagagcccaaggtatccccagggtccaagaga
ccctcaggggggaaggccgagagaggagggaagaaggcaaaaaagaaagaggcaggggag
acggaaaaggctgtgtcggtgggacagaaacccaagaactccaagcgccgcagcatagcc
tcgaaggtgagctacaaagaggagagcagtgaaggggaggggccaagtgatggggaggag
ttccagctgaccaatgaggaagacagtgaggactctgagggaggagccaaagcaatccga
gccaagaaagtaaaaggaggtaagagcaggagtacagctccacagaaaataagtagtgga
ggcaagaagaaagtgaagagtgaagaggaggatgacgattgggagggaaacgaaaaggag
ggggaggaagagcagggcatgaagcggggcaagaggaaggaggggaagggtgcagacgag
tggctggaggtgtacctggagaagactgggtgctgggtctgtgtggaagtgctgcagggc
gtggggcagcctcaactgtgctccaagcaggccacccatcccatgacctacgtggtagcc
gtggacggggacggtcacctgaaggatctgggcagcaagtacgaccccacctggatgacc
tccaccagaaagcgccgggtggacgaggagtggtgggaggtgacgctggagccattcctc
ggacctgaatctgagagggatgtccaggaggataaagagctccaggcgaagttgctggac
aagccgttgcccacgtcgatagcagagttcaaaaaccacccgctgtatgccctgaagaga
catctactgaaatatgaagcgctctacccctccacggcggccatcctcgggtactgcagg
ggagagcctgtctattccagggactgtattcacacgctacactcccgagacacctggctg
aaggaggcgcgcactgtccgtctaggagaggagccctgcaagatggtgagagggttttcc
aatcgctctcggaaagtcaggatggcatcagagcagaaggacaaagatgacctggctctg
tttggtgaatggcagacggaggagtaccagcccccagtagctgtggatggcagggtgcct
cgtaacgacttcggcaacgtttacctgttcaagccctgcatgcagccagttggctgtgtc
cacctgcgtctgcctaacctccagagagtggctaagaagctggacatggactgtgcagct
gctgtcactggctttgactttcacggtggctactctcatgctgtaacggacggctacatt
gtgtgtgaggagcatgaggagatcctgagagcagcctgggcagaagaccaagagatacag
agacaaaaggagaaagagaagcgggaaaagagggcagtggctaactggactctgctggtg
aagagcctgctgatcagggagagactacagcgtcgctatgggaagaaaggcccaacaccc
gcaggaggcctggaccaactgaagagccaggatagggaaggggtagagggtctatcgtct
gacgaggaaggggaaggtgggccgaacacggcttctgccgcactggcacaggcctggccc
cagaacagacagggggagcaggacactggcacagggggagcctccaaaactacatccaaa
cggcagaaaaggggccaggaaaagcaccttttcccctttgagaaagtatga
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