Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139416395
Help
Entry
139416395 CDS
T10872
Name
(RefSeq) paired box protein Pax-7b isoform X1
KO
K09381
paired box protein 3/7
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139416395
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
139416395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
Pax7
Homeodomain
Homeobox_KN
HTH_23
HTH_32
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
139416395
NCBI-ProteinID:
XP_071021071
LinkDB
All DBs
Position
9:complement(45027791..45093506)
Genome browser
AA seq
511 aa
AA seq
DB search
MQSSLPGTVPRMMRPAPGQNYPRTGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKI
VEMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPRQVATPDVEKRIE
EYKRENPGMFSWEIRDKLLKDGVCDRSTVPSGEASSVSSISRVLRARFGKKDDEEDCDKK
DEDGEKKTKHSIDGILGDKGSRMDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAF
ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPGSG
MPTLPTYQLQDSGYPTTTLSQDVSGTVHRPQPLPPSTMHQGGLSGGDGGSAYGLSSNRHG
FSSYSDSFMSSSAPSNHMNPVSNGLSPQVMSILSNPSGVPSQSQHDFSISPLHGSLESSN
SISASCSQRSSDQSIKTVDSMASSQSYCPPTYSTSSYSVDPVTAGYQYSQYGQTAVDYLA
KNVSLSSQRRMKLGDHSAVLGLLQVETGQAY
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcgtctttgccaggaacagtaccgcgaatgatgcgaccagcgcctggacaaaac
tatccgcgcactggcttccctttggaagtgtcaactcccctgggtcaaggtcgggtaaac
caactcggtggagtgttcatcaacggaagaccactgccaaatcatatccgacacaagata
gtggagatggcccaccacggtatccgtccctgcgtgatctctcgacagctacgagtttcc
catggttgcgtgtccaaaattctttgtcggtatcaagaaacaggatcaatccgacccggg
gcaataggaggaagcaaacccagacaggtagcaacgcccgatgtggagaaacggattgag
gagtacaagcgcgagaatcccggcatgttcagctgggagatccgagacaagctgctgaag
gacggggtgtgtgacagaagcacagttccttcaggtgaggcctcatctgtgagttccatt
agtcgtgttctgagagctcgatttgggaagaaagatgatgaagaagattgtgataaaaaa
gatgaagacggagagaagaaaaccaaacacagcatcgatggcattcttggcgataaaggt
agccgtatggacgaaggctcagatgtggagtcggagccggaccttcccctgaagaggaaa
cagaggcgcagtcgcaccactttcacggccgaacagctggaggagctggagaaggccttt
gagaggacacactatcccgacatctacaccagagaagagctggcccagaggaccaagctc
acagaggcccgtgtacaggtgtggttcagcaaccgacgggccaggtggcgtaagcaagcg
ggagccaatcagctggcggcgttcaatcacctgttgccgggcggattcccaggcagcggc
atgcccacgctacccacctaccagctccaagattccggttaccccacaaccacactatca
caagacgttagtggcacggttcaccgccctcagccattaccaccgtccaccatgcaccag
ggagggctgtcgggtggggatggcggctcggcctacggcctgtcgtccaaccgtcatggc
ttctccagctactccgactccttcatgagctcctcggcacccagtaaccacatgaacccc
gtcagcaacggcctctccccacaggtgatgagcatcctgagtaaccccagcggcgtgccc
tcacagtcccagcatgacttctccatctcgcccctccacggcagcctggagtcgtccaac
tccatctcggccagctgcagccagcgctcctcagaccagtccatcaagacggtggacagc
atggcctcctcccagtcctactgccctcccacctacagcaccagcagctacagtgtggac
cctgttacggccggctaccagtacagccaatacggacagactgctgtggactacctggcg
aagaacgtgagcctgtccagccagcggaggatgaagctgggagaccactcagccgtcctg
ggactactccaggtggagacgggacaggcctactag
DBGET
integrated database retrieval system
