Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139416454
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Entry
139416454 CDS
T10872
Name
(RefSeq) PR domain zinc finger protein 2
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00310
Lysine degradation
ocla01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
139416454
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139416454
03036 Chromosome and associated proteins [BR:
ocla03036
]
139416454
Enzymes [BR:
ocla01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
139416454
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
139416454
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
139416454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-C2H2_6
zf-C2HE
zf-C2H2_jaz
zf-C2H2_ZNF462_1st
Motif
Other DBs
NCBI-GeneID:
139416454
NCBI-ProteinID:
XP_071021173
LinkDB
All DBs
Position
9:complement(48662123..48681053)
Genome browser
AA seq
1475 aa
AA seq
DB search
MEDSHTLYISELGDDDHLEEEMEDKELEETHCSLYLMSMETDELADSNTSCQKPEATSGC
GLKQDLGSVSHSATPELPEDPDHDPDVELQDSFPCQFCERNFTSKQGLERHIHIHTLANH
HTHIFKCKYCSKSFGSKIGRRRHERRHENAKARPGSLIKPVEPPSSALQRNGPECVSSPS
SSSASVLADREQASTSDEHGELQGGHTCKYCKKVFSTHTNMRRHQRRIHERHLRLKGKEA
PLLQEAKHPKLPPIKSQQDTNNTSPVAVLEIESDQEEQYMLDISGNISENLSFYIDGKIV
STSTVSGCEVVEVNSGSATLVGLNAVIINPAQISQALKVETATHTGKGISGQPLTKRRTA
TPPLLPQIKTELESEVLSSSSSIVSSLIESLIPQNTESTILQRERTVYLSPKLKQLLQMQ
DGLKPSFALITEGQKLCSPLSLTVLPAGLGRFKRRTGSPPNSPQQSPMSNVESTTTDVGV
SIAVNAPTSESQCSSPACSLSSNDESEISKSPPVNNAMTTRVLPEGWSPMSGGCSCNQQP
LDLSNAVKKSEDEALREAVLDLSVHRKSADSEAKIILVPQPLNKKRKPNTSMLEKVLMNE
YANLEVVAEQELSILENHDAPLVTDFAIVTASDMSPATEGEVFGLTFPSAALSPSPSSLA
SVPRQSISPCTIALASPSPHPILPTAPSLITVLAPPTSSYSNSTNQPILQVLASKISPNP
LIICTEDSLNSAECEWRAALPDWATSNSASQLAISKPLDPTLNLQGHVFLTDHTLNQIAL
NTTTVESNIGFEVPTCSPALTLNDSLINSFDITSNTVLIECTVALETPENLVPTTIDFQE
NNFESTAPAQIVINQQQPLSLPHETIDPTILVSSLEQSVTLSTLSAVISECPTRQESISS
PVPAIIKTESNQKVVSEDISICPSKTPPPSEGTSRVEESSNETLSKLQDTFTKEFICNVC
DKLFHSMKELGHHVSEHSDEWPYKCEFCVLLFGKPTALLDHRSTLHGVGKSYVCCACTKE
FAYLCNLKHHQKELHPGQECKYTEEENGKLRPQNYNNATKVSTEALSYCAMAESNKPVIK
DEGELDDATEELFTTIKIMASEGGKPKGLDVCLGINQHYPSFKPPPFPYHNRTPVGSVAS
ATNFTTHNIPQTFSTAIRCTKCGKSFDNMPELHKHILACANASDKRRYTPNKNPIPLRHF
AKAQNGVLSSTNSTNGQNALHTTSQTNRPKLNQEPPAKLKLNALNKRKKQLVQRAISQRG
KSTSLTKKTSSLVHEEQEIYVCPHCIREFTYRRSRTKHMAVCPRKPAAKEAKKRKDGSIS
YTKENNGHLRREVLHLEEKSDHEQKSRAHSSSPTKRTAILPAHKVLSNKKSKAIIAMASV
QTPQEAPKLTALSLVRPFNSPQRQGSRMQHGVKEIRSNITMVKSHQQLYEHPCSQSGRVR
GPVTRSLQQIVVTDSAKEEQLTSQEPPGDLQDPSI
NT seq
4428 nt
NT seq
+upstream
nt +downstream
nt
atggaagactctcacactttatacatctcagagttgggagacgatgaccatttagaggag
gagatggaggataaggagcttgaggaaactcactgcagtctttatttaatgtccatggaa
acggatgagctggcagattcaaacactagttgccaaaaacctgaggcaacttcaggctgt
ggcctgaagcaggatttaggatcggtctcccattcagcaacccctgagctcccagaggat
cctgaccatgaccctgatgtagagctccaggactcatttccctgccaattctgtgaaaga
aattttaccagcaagcaaggcttagaacgtcacatacacatccacaccttagctaaccac
cacacacacatatttaagtgtaagtactgcagcaagtcctttggctcaaaaattggccgg
cgacggcatgagaggagacatgaaaatgcaaaggcaaggcctggatctttgataaagcct
gtggagcctccaagttctgccctacagcgcaacggtccagaatgtgtgtcttctccaagt
agctccagtgcctctgttttggcagacagagaacaggcgtctacgtcagatgaacatgga
gaattacagggtggtcacacttgcaagtattgcaaaaaggtttttagcacgcatacaaac
atgcgacgacatcagcgcaggatccacgagcgccatctccggctcaaaggtaaggaagcc
ccactgttgcaggaagcaaaacatccaaagctaccccctattaaatctcaacaggatacc
aacaacacaagcccagtagcagttcttgagatcgaaagtgaccaagaggagcaatatatg
ctggatatctctggtaacatctctgagaacctcagcttttatatagatgggaagattgta
tcaacaagcactgtcagcggctgtgaggtagttgaagtgaactctggatctgctacttta
gtcggactaaatgctgtgattattaatcctgcccagatcagtcaggctcttaaagtagag
actgctactcacacaggaaaagggatatctggtcaacccttgacaaaaaggagaactgcc
acaccacctcttctaccccaaatcaaaacggaattagaatcggaagttttgtcctcttct
tcatcaattgtgtcatctttgatagaaagtctcattcctcagaacacagagtctactatc
cttcagagagagagaacagtttatctgtcacctaagctgaaacagctcttacagatgcaa
gatggcctcaaacccagctttgccctgatcacagaaggccagaagctgtgttcaccactt
tccctgactgtcctcccagcaggattggggaggtttaaaagaaggaccgggtctccccca
aactcaccacaacaaagccctatgtcaaatgttgaaagcacaacaaccgatgtgggtgtt
tctattgctgtcaatgccccaacgtcagagagccaatgcagttcacccgcatgcagttta
tccagcaatgatgagagtgagatctccaaaagtccaccagtaaacaatgcaatgacaact
cgtgtcttgccagagggatggtccccaatgagtgggggttgttcctgcaaccagcaacct
ttggacctctcaaatgctgtcaagaaaagtgaagacgaagccctgcgggaagctgtgttg
gacttgagtgtgcacagaaagagtgcagattcggaagcaaagataattttagttccacag
cccttaaataaaaagaggaagccaaacaccagcatgttggagaaggtgctgatgaatgag
tatgcaaacctagaggttgttgcagagcaagaattaagtatattagaaaatcatgatgca
ccgttagttacagactttgccatagttactgcttcggatatgtcacctgctactgaaggc
gaggtgttcggattaacttttccctctgcagcacttagtccatccccttcctctctagct
tcagtccccaggcaatcaatctcaccatgcaccatagcacttgcttccccatctccacat
ccaatcttacccactgctccgtcgctaattactgttttagcaccaccaacatcttcctat
agcaattccacaaatcaacctatccttcaagtattggcatctaagatatctcctaatcct
ttaataatctgcacagaagattcattgaattcagctgagtgtgagtggagagctgctttg
ccagattgggctacctctaattctgcaagccaacttgccatctctaaaccccttgaccca
actctcaatctacaagggcatgtgtttctcacagatcacactttaaatcaaatagctctg
aacactaccacagttgaatccaacattggatttgaagtgccaacatgctctccagcttta
actctaaacgattcccttatcaactcctttgacattactagtaatactgttttaattgaa
tgcacagttgctcttgaaaccccagagaaccttgtccctaccacaattgatttccaagag
aataattttgaatccacagcacctgcgcaaattgtcataaatcagcagcagcctctgtcc
ttgcctcatgaaaccattgaccctactattttagtatcttctttagagcaatcggttacc
ctttcaacgctgtctgcagtcatatctgaatgtccaactcgtcaagaatcaatttcctcc
cctgttcctgccattattaaaacggaatcaaaccaaaaggtagtatcagaggacatatct
atctgcccctctaaaacgccgccaccctctgagggcacaagtcgagtggaagaatcctca
aatgagaccctctccaagctacaagacactttcactaaggaattcatatgcaatgtatgt
gataagctttttcattcaatgaaggaactgggtcatcatgtaagtgagcattctgatgaa
tggccatacaaatgtgagttctgtgtgctactctttggaaagcccacggcattgcttgat
cacaggtcaaccctccatggcgtcggcaagagctatgtttgctgcgcatgtacaaaggaa
tttgcttatctttgcaacctgaaacatcatcaaaaggagttgcaccctggccaggaatgc
aaatacacagaggaagaaaatggcaagctacgaccccagaactataacaatgcaacaaaa
gttagcacagaggctttgtcctactgtgccatggcggagtccaataaacctgtcataaaa
gatgagggagaattagacgacgctactgaggaactctttaccacaataaagataatggct
tctgagggaggcaaacccaaaggcctggatgtttgccttggcatcaaccaacactatccc
agttttaagccgcctccgtttccctatcacaaccggacacctgttggctctgtagcatca
gctaccaacttcaccacccacaacatcccacaaaccttcagcactgctatccgatgcact
aaatgcggcaaaagctttgataacatgccagagctgcacaaacacattcttgcctgtgca
aatgccagtgacaaaagacgctatacacccaataagaaccccattcctcttcgtcacttt
gcaaaagcccaaaatggagtactgtcctctactaattccacaaatggccaaaatgctcta
cacacgacaagtcaaacaaatcgtcccaaactcaatcaggagccacctgccaagttgaag
cttaatgcactcaacaaaaggaaaaaacagctggtacagagggccatttcacagaggggt
aagtctacctctttgacaaagaaaacctcttctctagtccatgaggagcaagagatctat
gtctgtccacattgcattagagaattcacataccgccgcagccggaccaagcacatggcc
gtctgccccaggaaacctgctgccaaagaggccaagaaaagaaaagatggcagtatctct
tacactaaggaaaataacggccaccttcgcagagaagtccttcatttggaagagaaatct
gaccatgaacagaaaagcagagcccatagttcaagtccaacaaagaggacagccatatta
ccagctcataaagtcctgtcaaacaaaaaaagtaaagccatcattgcaatggcaagtgtc
caaacaccgcaggaggcacccaaactgactgcactgtctcttgttcgccctttcaactcc
ccacaacgtcaaggcagtaggatgcagcatggtgtgaaggaaattcgttctaacattaca
atggtgaaatcccaccaacaactctatgagcacccctgcagtcagagtggaagggtgagg
ggaccagtgacccgcagtctacagcagattgtcgtcacagattcagcaaaggaagaacag
ctgaccagtcaggagccaccaggggatctgcaggatccttcaatttga
DBGET
integrated database retrieval system