KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139416485
Entry
139416485         CDS       T10872                                 
Name
(RefSeq) troponin C, skeletal muscle
  KO
K12042  troponin C, skeletal muscle
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04020  Calcium signaling pathway
ocla04814  Motor proteins
ocla04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04020 Calcium signaling pathway
    139416485
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    139416485
   04820 Cytoskeleton in muscle cells
    139416485
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ocla04812]
    139416485
Cytoskeleton proteins [BR:ocla04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Troponins
     139416485
SSDB
Motif
Pfam: EF-hand_7 EF-hand_1 EF-hand_6 EF-hand_8 EF-hand_5 EF-hand_9 EF-hand_FSTL1 EH AIF-1 EF-hand_11 SPARC_Ca_bdg SAPC2_N TerB Syntaxin EF_EFCAB10_C EMG1 EF-hand_EFHB_C DUF5580_M
Other DBs
NCBI-GeneID: 139416485
NCBI-ProteinID: XP_071021225
LinkDB
Position
9:complement(50442450..50445317)
AA seq 160 aa
MTDAQQEARSFLSEEMLNEFKAAFDMFDTDGGGDISTKELGQVMRMLGQNPTREELDEII
EEVDEDGSGTIDFEEFLVMMVRLLKEDQAGKSEEELAECFRVFDKNADGYIDREEFAIII
RSTGEQISEEEIDELLKDGDKNADGMLDFDEFLKMMENVQ
NT seq 483 nt   +upstreamnt  +downstreamnt
atgactgatgcacaacaggaggcccgctcattcttgagcgaggagatgcttaacgaattc
aaggctgccttcgacatgttcgacaccgacggtggcggcgatatcagtaccaaggagttg
ggtcaggtcatgaggatgttgggccagaacccgacaagagaggagttggatgaaatcatt
gaggaggtcgatgaggatggaagcggcaccatcgacttcgaggagttcttggtcatgatg
gtgaggctcttaaaggaggaccaggccggaaagtctgaggaagagttggcggaatgtttc
cgtgtgttcgacaagaatgccgacggctacatcgacagagaagagttcgccatcatcatc
cgcagcacaggcgagcaaatctcagaggaggagattgatgagctgctgaaggatggagac
aagaacgctgatggcatgctggactttgatgaattcctcaagatgatggaaaatgtgcag
taa

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