Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139416494
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Entry
139416494 CDS
T10872
Name
(RefSeq) carbohydrate sulfotransferase 1-like
KO
K01022
keratan sulfate 6-sulfotransferase 1 [EC:
2.8.2.21
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00533
Glycosaminoglycan biosynthesis - keratan sulfate
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00533 Glycosaminoglycan biosynthesis - keratan sulfate
139416494
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ocla01003
]
139416494
Enzymes [BR:
ocla01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.2 Sulfotransferases
2.8.2.21 keratan sulfotransferase
139416494
Glycosyltransferases [BR:
ocla01003
]
Unclassified
Sulfotransferases
139416494
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sulfotransfer_1
Sulfotransfer_3
Motif
Other DBs
NCBI-GeneID:
139416494
NCBI-ProteinID:
XP_071021268
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All DBs
Position
1:49541863..49544819
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AA seq
430 aa
AA seq
DB search
MNSAMQCSWKAVILLALLSIAIQYTAIRTFTAKPFQMCPVTASNPLNCGMLWQDAVDSSF
DQRICDDFLYFTSNVSRKTHVLILATTRSGSSFVGQLFNQHQDVFYLFEPLYHVQTTLLP
RLSHSRTAGDTRVMLGASRDLLRSLYDCDLYFLESYIKPQPANHSTDKLFRRGASKALCS
LPVCDAPSPGELNIDEGECVRRCGGLNMTLASDTCRERRHVAIKTVRIPEVSDLRALVED
PRLNLKVIQLVRDPRGILASRIETFRDTYRLWRIWRATGRRPYNLDLTQLTMVCEDFLGS
VTTGLSRPPWLKGRYMLVRYEDLARNPLQKTKEIYEYLGLIMDKNVGDWIQNNTRGSNDL
SAKHKYGTVRDSAANAESWRLKLSYDMVDYTQTVCQQVLQELGYKTVSSPEELKNLSLTL
IEDKTFLPFL
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgaattcagccatgcaatgttcctggaaggctgtgattctgctagccttactgtccata
gcgatccagtacacagccatcaggacgttcacagccaagccattccagatgtgtccagtg
acagcctcaaaccctctgaactgcggcatgctgtggcaggatgcggtggactcgtccttt
gaccagcggatctgtgacgacttcctttacttcacctccaacgtctccagaaaaacccac
gttctcatcctggccacgacccgcagcggcagctccttcgtgggtcagctgttcaaccag
caccaggatgtgttttatctgtttgagccgctctaccacgtccagaccaccttgctcccc
cgcctgtcccacagcaggacggcaggcgacaccagggtgatgctgggggccagcagggac
ctgctccggagcctctacgactgtgacctttacttcctggagagctacatcaaaccccag
ccggccaatcacagcacagacaagctgttccggaggggagcaagtaaggctctgtgctcc
ctgcccgtctgcgacgcccctagtcctggagagttgaacattgatgaaggagagtgcgtc
aggaggtgtggcggtctcaacatgacgctggcgtcggacacctgccgtgagaggcgccat
gtggccatcaagacggtgaggataccagaggtgagtgacctcagggctctggtggaggac
cctaggctcaacctcaaggtgatccagctggtcagggacccccgagggatcctggcctcc
cgcatcgagaccttcagggacacctatagactctggaggatctggagggccactgggagg
aggccctacaacctggacctcacccagcttaccatggtctgtgaggacttcctgggttct
gtgacaacgggcctcagcaggcccccctggctcaaagggaggtacatgttggtcaggtat
gaggacctggccaggaaccctctccagaagaccaaggagatctatgaatacctgggtctg
atcatggacaagaacgtaggcgactggatccagaacaacaccaggggaagcaacgatctg
tccgccaagcataaatacggcactgttcgggactcagctgccaatgcggaaagctggagg
ctcaaattgtcttatgacatggttgattacacacagactgtgtgtcagcaagttctacag
gagcttggttataagactgtcagttcccctgaggagctgaaaaatctgtctctgactctc
atcgaggacaaaacttttttaccttttttgtag
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