Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139416555
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Entry
139416555 CDS
T10872
Name
(RefSeq) lysosomal amino acid transporter 1 homolog
KO
K23678
solute carrier family 66 (lysosomal lysine-arginine transporter), member 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
139416555
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocla02000
]
139416555
Transporters [BR:
ocla02000
]
Solute carrier family (SLC)
SLC66: Lysosomal lysine-arginine transporter
139416555
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GFIT
Motif
Pfam:
PQ-loop
PGG
MtN3_slv
Motif
Other DBs
NCBI-GeneID:
139416555
NCBI-ProteinID:
XP_071021414
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Position
9:complement(54100145..54109340)
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AA seq
314 aa
AA seq
DB search
MSLNMGSADGVLKWGSFGWNTDGNFSSVCPNGSVWVWEGLGECAQDSRDMASVILGLLSI
VCFMVSSLPQYYSSCKSGNMDSALSIWFLLLWLGGDSCNLVGSFLADQLPLQTYTAVYYV
LADLLMLGLYFYYVSKHRMNNNRSVLNVVGVVYILGFFASLIALPGSGSQQDVVLSGFKG
RALLSTTVDSVKAFSTKEIIGFTIGSISSVLYLCSRLPQMHTNYTRKSTEGVSYFLFALV
ILGNTTYGLSVLLKNPEQGQGEGSYVIHHLPWLIGSLGTLSLDILISIQFLIYRNNAPLE
LESQHDERAPLLDK
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgaatatggggtcagctgatggtgtcctcaagtgggggtcttttggatggaac
actgatggaaacttcagctctgtatgccccaatggatcggtatgggtttgggaagggcta
ggggaatgtgcccaggactccagggacatggccagtgtcatcctgggtctgctgtctata
gtgtgcttcatggtttcttctctgccgcaatactacagctcttgtaagagtgggaatatg
gacagtgccttgtccatttggtttctgttgctgtggctggggggtgactcctgcaatctt
gtaggctcattcttagctgaccaactgccgctacagacatacacagcagtgtattatgtc
ctggctgacttattgatgctgggattgtacttttactacgtatctaagcacaggatgaat
aacaacaggtcggttctaaatgtagttggtgtagtctatatactgggcttctttgccagc
ctcattgccttacctgggtcagggtcccaacaggatgtggtcctctctgggtttaagggg
cgggccttgctgtcaaccactgtggacagtgttaaggctttcagcaccaaggagattatt
gggtttaccattggctccatatcctcagtgctctacctctgttccagactgccacagatg
cacactaattacacaaggaagtcgacggagggtgtgtcctacttcctgtttgccctggtc
atcctgggtaacactacgtacggcctgagtgtgctgctgaagaaccctgagcaaggccag
ggagagggaagctacgtcatccaccacctgccctggctcataggaagcctgggcaccctc
tctctagacatcctgatctccatacagttcctgatataccgcaataatgcacctctggag
ttggaatcgcagcatgatgagagagctcctctgctggacaaatga
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