Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139416599
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Entry
139416599 CDS
T10872
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
139416599
Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
139416599
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Ortholog
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GFIT
Motif
Pfam:
LRR_8
I-set
LRR_4
Ig_3
LRR_1
ig
fn3
Ig_VEGFR-1-like_5th
Ig_2
LRR_5
C2-set_3
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
139416599
NCBI-ProteinID:
XP_071021558
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All DBs
Position
1:complement(54952084..54961893)
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AA seq
652 aa
AA seq
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MWAKMFLVFFLGLYLATGAFPSSVSACPSQCSCFFHNLSDGSKARSVICNDPEISLVPAN
FPVDTSKLRIEKTAIQRIPSEAFNYLRNLEFLWMSFNVLSALNSDSFRGLLDLEELRLDG
NALTSFPWESLMDMSSLRLLDLHNNRLTSVPADATMYIKNLTYLDLSSNNLLTVPAEVLA
TWLTVKSSHGPDSSKMILGLHDNSWVCDCRLYDLIQFQKSPTLFVALIDTRLRCSAPESL
SGVLFSDSEGRRCQAPRIHTAVARVRSALGNNVLLRCGTIGIPSPDLAWRRADGKALNGT
VQQENSKEGIVWSILSVPAVSYRDSGKYVCKANNYAGNAEAVISLVISEAPPKPDNNNNL
TSVVAAAVKKIKVKKPNGIGKAAYQEKLVARVGVPTTSPPHPLVVLDSSPAPEGVGSVAD
RAIPGPTTLPSPDGLLELEKTNLSNLAQAQYDPDRIVRSVKVLGDTENTITLNWRAPKAK
NTTAFSVLYAVFGERDMRKINVAAGQNRVFIEGLVPKTKYIACVCVRGLIPKKEQCVIFS
TDEAASAAGTQKLINVIVITVACVIAVPLTVIVCCGALKRRIQKMWGKKSKDIQDSYVTF
ETLSPGTKAKGLDGEYLTRLNPEESNRLLSARSSLDSEATAKIEGQPNEYFC
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgtgggccaaaatgttccttgtgttcttcctgggactctacctggcgacaggtgcgttt
ccctcctcggtgagtgcgtgcccgtcacagtgcagctgtttttttcacaacctaagtgat
ggatctaaggccaggagtgtcatttgcaatgaccctgagatctcccttgtgcctgccaat
ttccccgtggacacgtccaagctgcgtatcgagaaaacagccatccaacggatcccaagt
gaagccttcaactatctccgaaatctggagttcctttggatgtcctttaacgtgctgtcc
gctctcaactcggacagtttccgtgggctgctagatctggaggagctgagactggatggg
aatgccctcacttcgttcccctgggagtctcttatggatatgtccagcctcaggctgctg
gacttgcacaacaaccggttgacctcagttcccgcagacgccacaatgtatataaaaaac
ctgacctacctggatctatccagcaacaaccttctgactgtcccggccgaggtgctagcc
acttggctaacagttaaatcttcgcatggcccagatagctccaaaatgatacttggtctc
catgacaactcctgggtgtgtgactgccgcctgtacgacctgatccagttccagaagtcg
ccaacgctcttcgtggcattaatcgacacgcgcctccgctgctccgcccccgagagcctg
tcaggtgttctgttcagcgactccgaggggcggagatgccaggcgccgcgcattcacaca
gcagtggcgcgagtccgcagcgccttgggaaacaatgtgcttctgcgctgcgggaccatc
ggcattcccagtcctgatctggcctggcggagggcagatgggaaagccctgaatgggaca
gtccagcaggagaactccaaggaaggcatcgtctggtcaatcctcagtgtcccggccgtg
tcctaccgtgactcagggaagtatgtctgcaaggccaataactacgccggcaatgccgag
gccgtcatctccctagttatctctgaagcacccccaaaacccgacaacaacaacaaccta
accagcgtggttgctgctgccgtaaaaaaaatcaaagtcaagaaacccaatgggataggg
aaagcagcataccaggagaaactggtggctagggtaggggttcccaccaccagccctcca
cacccacttgttgtgttggactccagccctgcgcctgagggtgtggggagtgtagcagat
agagccatccctggaccaaccactttgcctagtccagacggactcctggagctggagaaa
accaacctgagcaacctggcccaggcacagtatgacccggaccggatagttcgctctgtc
aaggtgttgggcgacacagagaacaccatcaccctgaactggcgggcacccaaggccaag
aacaccacagctttcagcgtgctctacgctgtcttcggtgagcgggacatgcgcaagatc
aatgtggcggcgggccagaatcgcgtcttcatcgagggcctggtgcccaagaccaagtac
attgcttgcgtttgcgtccggggcctgatccccaagaaggagcaatgcgtcatcttctca
accgatgaggcggccagcgcagccggcacccagaagctcatcaacgtcatcgtgatcacg
gtggcgtgcgtcatcgccgtgccgctcaccgtcatagtgtgctgtggcgcactcaagagg
cgcatccagaagatgtggggaaagaagtccaaggacatccaggattcgtacgtgactttt
gagacgctgtcccccgggaccaaggctaaaggtttggatggtgagtacctgaccagactc
aaccctgaggagtccaaccgactgctgtcggcccgctccagtctggactcagaggccacg
gctaagatagagggacagcccaacgagtacttctgctga
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