Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139416609
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Entry
139416609 CDS
T10872
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1B-like
KO
K15559
regulator of Ty1 transposition protein 103
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ocla03021
]
139416609
Transcription machinery [BR:
ocla03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
139416609
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CREPT
CID
CTK3
pre-PUA_NIP7
Sulfotransfer_2
SAE2
Motif
Other DBs
NCBI-GeneID:
139416609
NCBI-ProteinID:
XP_071021576
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Position
9:57471050..57480932
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AA seq
331 aa
AA seq
DB search
MSSFSESALEKKLSELSNSQQSVQTLSLWIIHHRKHSPLIVKVWHRELKKAKSSRKLTFL
YLANDVIQNSKKKGPEFAKDFETVLVDACSHVAREADDGCRRPIDRLLTIWQERSLYKAE
FIQQLKLAIEDSNSPQHQPTEEKKAPKRTYQKMIQEPEEEEEDDYRGNMSPQNSDFSGPQ
LTEELVKALQDLENAASGDAAVRQKIASLPQEVQDVSLLEKITDKEAADKLSKTVDEACL
LLAEYNGRLAAELEDRRQLARMLTEYIGSQKEALTEREKKLEEYKQKLARVTQVRKELKS
HIQSLPDLSLLPNVTGGLAPLPSAGDLFSTD
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctttttctgagtctgcgttggagaagaagctttctgagctcagcaactctcag
caaagcgtacagacgctgtctctgtggatcattcatcatcgcaaacactcgccgctcatc
gtcaaagtatggcacagagaactgaagaaagcaaaaagcagcaggaagttgactttcctg
tatcttgccaatgacgtgattcaaaacagcaagaagaaaggtccagagttcgccaaagac
tttgagacagtccttgttgacgcttgctctcatgttgcaagagaggcagatgatggctgt
agaaggcccatcgacaggctgctcactatctggcaggagcgcagcctctacaaggcagag
ttcatccagcagctgaagctcgctatcgaagactcaaacagcccccaacaccaacccaca
gaggagaagaaggcccctaaacggacctatcagaagatgatccaagagccggaggaagag
gaagaagatgactacaggggcaacatgtccccacagaattcagacttctcagggccacag
ctgacggaggagctggtcaaagccctgcaggacctggagaatgcagcctcgggtgatgct
gcggtgcgccagaagattgcctctctgccacaggaggtgcaggatgtgtccctgctggag
aagatcaccgataaagaggcagctgataaactctccaagacagtggatgaggcctgtcta
ctgctggctgagtataacggacgtctggctgctgagctggaggacaggaggcagctggcg
cgcatgctgaccgagtacatcggtagccagaaggaagccctcacagagagggagaagaaa
ctagaagagtacaaacagaagctggcacgagtcacgcaggtgcgcaaggagctcaagtct
cacatccagagcctgcctgacctctctctgctgcccaatgtgacgggaggcctggcccct
ctaccctctgctggagacctgttctccaccgactga
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