Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139416616
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Entry
139416616 CDS
T10872
Name
(RefSeq) bridge-like lipid transfer protein family member 3A
KO
K28453
bridge-like lipid transfer protein family member 3A
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139416616
Membrane trafficking [BR:
ocla04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
139416616
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
BLTP3A_B
VPS13_N
Motif
Other DBs
NCBI-GeneID:
139416616
NCBI-ProteinID:
XP_071021595
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Position
9:complement(58193408..58259400)
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AA seq
1357 aa
AA seq
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MAGIIKKQILKHLSRFTKNLSPDKINLSTLKGEGQLSNLELDEEVLQNMLDLPTWLAVTR
VYCNKAAIRIQWTKLKTSPICLFLDKVEVEMRTCEEPRAPNGPSPIAITAGQSEYGFAEK
VVEGMSVIINSITIKVQSRAFHASFELWQLQGNSLNPKWQKTDLRYTRITDPKRGEVLTF
KEINWQSLRIEADAIESEDQDLGSIPLRLITNQGRIRIALKRRVKDCNVLASKLLFILDD
LLWVLTDSQLKAVIHYAKSLSEAMEKSAQQRKNMAAESLQTAPPSPGIHNLWTDPSPPPS
VGVPSTLDQYFDQHDVKESSYHTFISRLDLHICNDSSSADPDEPPPPGSQGAMQLTFRKL
GFDYYPIHRPADGCQHWEHHCGAMEARAQWACRLLQEFQRRVEASGIPGPHSEIPNQAKD
SPAKRAHDGQPSPPDRDQSSRRNSIAPPPPGNPLKRLRSSCVVVRMDDLDIHQVSTGGRH
SKKTQSLISCNRKALNLADNIPAIHLQFTEYYFPDNPGLPVPNTNLYAQLNGLQLCLDPA
SLLWVNLFSRGLLRTLEQVKAFYQLQDGSKAEEHVDIRMDAAQIKLIIPLESSIMDHQDR
PQSLNITVPQTVLSNTCHSPHGTRADLNATYSSFSTCHFFQSAPPCSFPRDQSAFLPLPS
AFLQHSLEMEPLPFSEMRPLRAKDVWSLSLSRLSVSFEGARKSNKGRAHPFVEPFTMSVW
ICRPCAFKGCSLVSSPSEPAPVDPNHGSLEQENQLPFNPDHHNQGSKKEAPVASIHFLAQ
AITPVKVWLNHYQYVALLRMKDTLARLGGELGRDTRDAKQARGQESEPPTMCLALLMDSV
ELGLLLPPAAMEPEEEAHTPGSESPSLTDSDLSPTHQATSPGLLEDSGIGNGTATVNSSP
PIEQEVDGVVEEASEAVEVMEGETTQEDGPVPSPPFSPEHHPSLLSRDPSTFSLEEELSN
ALTATKDVTKDAFSASLDLTKGAFSITKDAFSFMSRGSGMSKLFTTQAKEQRPEEGCPMA
SLRLQSMKLSLSQYSFDSAILDGSLPDDHLSVDSDSSDNILMDESGVESMMRPNSTLGPM
DSGGSAAPGTEGGSSADLSSSLSQSIEDITQDTASVLLLVLSGIACVADLKGEDLVVAVE
VQHLTSRQMGNVRVSDLLARQMSGGSTLGQRQGCRSAPVVGMRIEMGPSAARHGPLSALV
GHLELSVQGCRAELLASTLATLGPFLEDELSADVQPMKIRLDNITITLKDDGPKIYPTAP
QPQPATFTIDQVVLERSDDGLFRIKGGAGPDSAGGAVVCLEKPDSSCSVQPQQSTSPSQS
PSLGSQLLEAQLALSQALTDRERLLLEVRKYDPMFDL
NT seq
4074 nt
NT seq
+upstream
nt +downstream
nt
atggcaggaataataaaaaaacaaatattgaaacatttgtccaggttcaccaagaacctg
tctccagacaagataaacctgagcacactgaagggcgagggtcagctgtccaacctggag
ctggatgaggaggtgctgcagaacatgctggacctccctacctggttggctgtcacccgg
gtctactgcaacaaggctgcaatcaggatacaatggacaaagttgaagaccagccccatc
tgcctgttccttgacaaggtggaggtggagatgagaacgtgtgaggagccccgtgctcca
aatggcccctcccctattgccatcactgctggccagagtgagtatggcttcgctgagaag
gtggtggagggtatgtctgtcatcatcaactccatcaccatcaaggtgcagtcccgtgcc
tttcacgcctccttcgagctctggcagctccagggtaacagtctcaaccccaaatggcag
aagactgacctccgctacacccgcatcacagaccccaagagaggagaggttttgacgttt
aaggagatcaactggcagagtctgcgtatagaggctgatgccatagagagtgaagaccag
gacctgggcagtatcccactacgcctcattaccaaccagggacgcatccgcatcgccctg
aagcgcagggtgaaggactgtaatgttttggcctcgaagctgctcttcattttggacgac
ctgctgtgggtgctgacggactctcagctcaaagctgtcatccactacgccaagtccctg
agtgaggccatggagaagtctgcccagcagaggaagaatatggctgcagagtctctacag
actgcacccccatcccctggtatccacaatctatggacagacccttcacccccccccagc
gttggtgtacccagtaccctggaccagtactttgatcaacacgacgtcaaagagtcttcc
taccacaccttcatctctcgtctagacctgcacatatgcaacgacagctcctcagcagac
cccgatgagcctccacctccaggctcccagggtgcaatgcagttgaccttccggaagctg
ggttttgactactaccccatccaccggcccgctgatggctgtcagcactgggagcatcac
tgtggagcaatggaggcccgagcccagtgggcttgcagactgctgcaggagttccagagg
agggtggaggcgtcaggtatccctggtccacattctgagatccccaaccaggccaaggac
tcccccgccaagagggctcacgatggacagcccagcccccctgacagggatcagagctcc
aggaggaactcaatagcacctcctcccccggggaatcctctgaagaggctccgctctagc
tgtgtggtggtacgaatggatgaccttgatatccatcaggtgtctacagggggacgccac
agcaagaagacccagtccttaatatcctgtaaccgcaaggccctgaacctagcagacaat
ataccagccatccacctgcaattcacagagtattacttccctgacaaccctggtttgcct
gtgcccaacactaacctgtatgcccagctgaacggcctacagctgtgcctagacccagcc
agtctgctgtgggtcaacctgttctcgcggggcctactgcgtaccctggagcaggtcaaa
gccttctaccaactccaggacggcagcaaggcagaggagcacgtggacatccgcatggac
gcagcacagatcaagttgattattcccctggagtcatccatcatggaccaccaagacagg
ccccagtctctgaacatcactgttccccagacggtcctcagcaacacctgccactcccca
cacggcacccgggccgacctcaacgccacctacagcagcttctccacctgccacttcttc
cagtccgctcccccctgctccttcccccgagaccagagcgcctttctccccctaccctct
gccttcctccagcactccctggagatggagcccctgcccttttctgagatgaggcccctc
cgggccaaggacgtctggtccctaagtctctcccgcctgtccgtgagcttcgagggggca
cggaaaagcaacaagggcagagctcaccccttcgtggagcctttcaccatgtctgtgtgg
atatgtcgtccatgtgcgtttaagggctgttccctggtctcctctcccagtgaaccagct
cctgtagatcccaaccatggatccttagagcaggagaaccagctccctttcaaccctgac
caccacaaccagggcagtaaaaaggaggctccagtggcctctattcacttcctggcccag
gccatcacaccggtcaaggtgtggctcaaccactaccagtatgtggccctgctgcggatg
aaggacaccctggccaggctggggggcgagctgggccgggacaccagggatgctaagcag
gccaggggccaggagtctgagccccctacgatgtgcctagccctcctaatggactcagtg
gagctggggctcctgctaccacctgcagccatggagcctgaggaggaggcccacacccca
ggatctgaaagccccagcctgacagactccgacctctcccccactcaccaggctacatcg
ccaggccttcttgaggacagtgggataggaaatggtactgccaccgtcaacagctctcct
cccattgagcaggaagtggatggtgtggtagaggaggccagcgaggcagtagaggtcatg
gagggggagacaacccaggaggatggtcctgtcccctctcctcccttctcccctgaacac
catccctccctcctgtctagggacccctctaccttcagcctggaggaagagctgtccaac
gccctcactgccaccaaggacgtcaccaaagatgcatttagtgcctccctggacctgact
aaaggggctttctccataacaaaagatgccttcagcttcatgagtcgcgggtcagggatg
agcaagctgttcactacacaggccaaggagcagcgccccgaggagggatgccctatggcc
agtctgcggctccagtccatgaagctgtctctctcacagtactcatttgacagcgccatc
ctggacggaagcctgcccgacgaccacctctcagtggacagcgactctagtgacaacatt
ctcatggatgagtcaggagtagagtccatgatgcgacccaacagcacccttgggcccatg
gacagtggaggcagcgctgccccggggacagagggagggtcatcagccgacctgagcagc
tccctgtcccagagcattgaggacatcacacaggacacagcctctgtgttgttgctggtg
ctcagtggtattgcctgtgtggcggacctgaagggagaggacctggtggtggcagtggag
gtccagcatctcacctccagacagatgggcaacgtaagggtctctgacctgctggccaga
caaatgtcaggtgggtccaccctgggacagagacagggctgcaggtcagctccagtggtg
ggcatgcgaatagagatgggtccctctgcagcacggcacggtcccctctctgcgttggta
ggtcacctggagctgagtgtgcagggctgtcgggcggagctcctggcctccaccctggct
accctggggcccttcctggaggatgagctcagtgctgatgtccagcccatgaagatccgc
ctggacaatatcaccatcactctgaaggatgatggtcccaagatctacccgacggccccc
cagccccaacctgccacctttaccatagaccaggtggttctggagcgctctgatgatggc
ttgtttagaatcaaaggtggtgcaggcccagactctgcaggtggtgctgtggtatgtttg
gagaaaccagacagttcttgttctgtccaaccacagcagagcacgagtccatcccagagt
ccatccctggggtcccagctattggaggctcagttggccctctctcaagccctcactgac
cgagaacgcctcctcctggaggtcaggaagtacgaccccatgtttgacctgtga
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