Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139416617
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Entry
139416617 CDS
T10872
Name
(RefSeq) transcription initiation factor TFIID subunit 11
KO
K03135
transcription initiation factor TFIID subunit 11
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
139416617
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ocla03021
]
139416617
Transcription machinery [BR:
ocla03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
139416617
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAFII28
CBFD_NFYB_HMF
GMT-wHTH
Motif
Other DBs
NCBI-GeneID:
139416617
NCBI-ProteinID:
XP_071021596
LinkDB
All DBs
Position
9:58189127..58191051
Genome browser
AA seq
203 aa
AA seq
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MADPARIKTESNSENSLAARESPKTEDTEEVPVTSDADTESKDSSSQSLKREHKQDSVAG
DDEDEGTSDQPASKKLKVEPEKKKEKRQKVDEDEIQKMQVLVSSFSEEQLNRYEMYRRSA
FPKAAIKRLIQSITGSSVSQNVVIAMSGISKVFAGEIVEEALDVCEKWGDTPPLQPKHMR
EAVRRLKSREQIPNTKHKNILFH
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atggcagacccagctaggataaagactgaatccaactctgagaattcattggctgctaga
gaaagccctaaaaccgaagacactgaagaagtgcctgtgacctcggatgcagacaccgaa
tcaaaagattcctcctcacaatcactcaaacgcgaacacaaacaggactctgttgctgga
gatgatgaggatgagggaacctcagatcaaccagcttccaaaaaactaaaagtggagcct
gagaagaaaaaggagaagcggcaaaaggttgacgaggatgagatacagaagatgcaggtt
ttggtctcatccttctctgaggagcagcttaaccgctatgagatgtatagacgctctgct
ttccccaaagctgccatcaagaggctgatacagtccattacaggatcctcagtctctcag
aatgtggttatcgccatgtctggtatttccaaggtcttcgctggagaaatagtggaggaa
gctctggatgtgtgtgagaagtggggggacacgcctcccctgcagcccaagcacatgagg
gaggctgtcaggaggctgaagagcagagagcagatccccaacaccaagcacaagaacatc
ctctttcactga
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