Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139416653
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Entry
139416653 CDS
T10872
Name
(RefSeq) tumor necrosis factor receptor superfamily member 9-like
KO
K05146
tumor necrosis factor receptor superfamily member 9
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
139416653
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
ocla04050
]
139416653
04090 CD molecules [BR:
ocla04090
]
139416653
Cytokine receptors [BR:
ocla04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
139416653
CD molecules [BR:
ocla04090
]
Proteins
139416653
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
PsbH
OAD_gamma
Hol_Tox
Motif
Other DBs
NCBI-GeneID:
139416653
NCBI-ProteinID:
XP_071021687
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All DBs
Position
9:complement(60264268..60268840)
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AA seq
288 aa
AA seq
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MHLVLRVLCFSLLIPGCLSSTGEITIGCAQWRTSAGSPDICCESCHPGNRLVTPCGPDPK
KLCVPCRNETYTTDTTSFSCRRCTQCVGGALTLKKACTRSRDTECGCKAGLRCGDGHCSF
CVQECGKGQEPLPAARSCRNCPVGTFSDQIHEKCKPWRTSCPHPHEHIVALGDAVSDSKC
SITNNSIPQVITLPTKRGSEDGTGLVWAITASCGVFIILIILFLVIIINNKKKPEKTTHN
EPNLIVPTPPTDEPRSLIEVSFHHPQQEQGSSSETLHSQDSETKLLPV
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgcatctggtactcagggtactgtgtttctctctgctcataccgggctgtctgagtagc
actggtgagataacgataggctgtgcgcaatggagaacctctgctggttctccggatatc
tgctgtgaaagctgccatccagggaaccgtctggtgactccctgtggtccagacccgaaa
aagctgtgtgttccctgtaggaatgagacctacacaactgacacaacatcattctcctgt
cgcaggtgtactcagtgcgtaggtggggccctgacccttaagaaggcctgtacaagaagc
agggacacagagtgtggctgtaaggcaggactcagatgtggtgatggccactgctccttt
tgtgtccaggagtgtggaaagggccaggaacctcttcccgctgcacgctcctgccggaat
tgtccagttgggaccttcagtgaccaaatccatgagaagtgtaagccttggagaacaagc
tgtccccatccccatgaacacattgtggccttgggagatgcagttagtgacagcaagtgc
agcattaccaacaattcaatcccccaagtgattaccttacctacgaaacggggctctgaa
gatggcacagggctggtttgggctataacggcctcgtgtggagtctttatcatccttatt
atcttgtttctggtcatcatcatcaacaacaaaaagaaaccagagaagacaacccacaat
gagccaaaccttattgtgccaactcctcctacagatgagccgaggagcctgatagaggtc
agtttccaccaccctcagcaggaacagggcagcagttctgaaacactgcactcccaggac
tctgagaccaagctcctgcctgtgtga
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