Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139416659
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Entry
139416659 CDS
T10872
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ocla03400
]
139416659
Enzymes [BR:
ocla01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
139416659
DNA repair and recombination proteins [BR:
ocla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
139416659
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GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
139416659
NCBI-ProteinID:
XP_071021704
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Position
9:60570730..60573732
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AA seq
594 aa
AA seq
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MKIVSWNINGIRTFKGGIKNALESLDADIVCVQETKVTRDLLDERTAIVEGYNSYFSFSR
GRSGYSGVATYCKDSATPFAAEEGLTGLLTTNHEGTIGCYGDSSEFSSEELQLLDNEGRA
VLTQHRVMCEDTPETVTVINVYCPRADPEKPERKHFKLQFYKLLQCRAEAILEAGSRVII
LGDVNTSHRPIDHCDPDYIDDFEDHPGRKWLNGLLVDDSEGKEYEKNNEESENTSSKPLR
GGKFVDTFRHFHPTRSKAFTCWNTMTGARQTNYGTRIDYIFADHPLVKMGFVAADIMPEV
EGSDHCPVWGKLCCPLLSSSKLPPLCTRNLPEFAGRQQKLSRFLIKMDQQQPVREACRDP
VPGSQETGETRENLNPLGSAGTTSTGKKRKLAVESGVPKSKKIMTLKAATPKPQGNLLAF
FKPKSVPVAPTREDPVSQCERGEERNEVTPSQPHTFKGGHSAGQDVPSIPGTPCTEYPQG
VCMGDKVYVPGSNIQDASVNSQNQEKDAALASEATVDPPCPRKGASLGGFWKTVLRGPPP
PPPCKAHGEPCVLRTVKKAGPNMGKQFFVCNRPQGHASNPEARCNYFSWVDKGK
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgtcagttggaacattaatggcataagaactttcaagggtggaattaaaaat
gcgcttgagtcgctggatgctgacatcgtatgtgtccaagagacaaaagtaacaagagac
ctgctggatgagaggactgctattgttgaaggttataactcatatttcagctttagtcgt
ggacgcagtggctactcaggagttgctacttactgcaaagacagtgccaccccatttgct
gcagaagagggcttgaccggtctgctcaccaccaaccacgaggggaccattggatgctat
ggtgactcgagtgagttctccagtgaggagctgcagctcctggacaacgagggaagggct
gttctcacacagcacagagtcatgtgtgaagacacacctgaaacagttacggttatcaat
gtatactgcccacgagctgacccagaaaagcctgaacgtaaacatttcaaactgcagttc
tacaagctgcttcaatgtcgggctgaagcaattttagaagctgggagccgtgtaatcatc
ttgggagatgtgaatacatcccaccggcccatagatcactgtgacccagattacatagat
gattttgaggatcaccccgggaggaaatggttaaatggtttactggttgatgacagtgaa
ggaaaggagtatgaaaaaaacaatgaggagtctgagaatacctcatcaaaacccctccgc
ggcggcaagtttgtggacaccttccgccattttcacccaacacgctccaaggccttcacc
tgttggaacactatgactggagccaggcagaccaactatggcacacgtatcgactacatc
ttcgcagaccatcccttggttaaaatggggtttgtggcagcagacatcatgccagaggtg
gaggggtctgatcactgccctgtctgggggaaactgtgctgccccctcctgtccagctcc
aagctgcctcccctctgtacccgcaacctaccagagttcgctggcaggcagcagaaactc
tcacgcttcctcatcaagatggaccaacaacaacctgtcagagaggcctgcagggaccca
gtaccaggatctcaggagactggggagacccgagagaacctgaatccactgggatcagca
gggaccacctccactggaaagaaacggaagttggcagtcgaatctggtgtcccaaagagc
aaaaagattatgacactgaaggctgctaccccaaagccccaaggcaacctcctagccttt
ttcaagcccaaatctgtacctgtggccccaaccagggaagaccctgtgagtcagtgtgag
aggggagaagagagaaatgaagtgaccccatcacaaccacataccttcaagggaggacat
tctgcaggacaagatgttccatcaattccaggcacgccgtgcacagaatatccccagggt
gtctgtatgggagacaaagtctatgtacctggcagcaacatacaggatgccagtgtcaat
agtcaaaaccaggagaaggatgcagccctggcttctgaggctactgtagaccccccatgt
cccaggaagggggcttcactgggcggtttctggaagacggtcctgcgtgggccaccccca
ccgcccccctgtaaggctcatggggaaccctgtgtactccgcacagtcaagaaggcaggt
ccaaacatgggcaagcagttctttgtgtgtaaccgccctcagggccatgcatccaatccc
gaggctcgctgtaactacttttcttgggtggataaaggaaaatag
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