Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139416661
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Entry
139416661 CDS
T10872
Name
(RefSeq) cysteine protease ATG4B-like isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04136
Autophagy - other
ocla04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
139416661
04136 Autophagy - other
139416661
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ocla01002
]
139416661
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139416661
03029 Mitochondrial biogenesis [BR:
ocla03029
]
139416661
Peptidases and inhibitors [BR:
ocla01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
139416661
Membrane trafficking [BR:
ocla04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
139416661
Mitochondrial biogenesis [BR:
ocla03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
139416661
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
139416661
NCBI-ProteinID:
XP_071021749
LinkDB
All DBs
Position
1:complement(4897365..4920420)
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AA seq
447 aa
AA seq
DB search
MDAATLTYDTLGFGEFEDFPETSEPVWILGKEFNALTEKDDILSDVTSRLWFTYRKNFSP
IGGTGPTSDTGWGCMLRCGQMILGEALVCRHLGRDWRWVRGQPQRGQYISILNAFLDKKD
SYYSLHQIAQMGVGEGKSIGQWYGPNTVAQVLKKLTVFDSWSRLAVHVAMDNTVVMEEIK
RLCMPWLDYGGAACAEPPGWIPKHNGCLEGACALAEEETALWKPLVLLIPLRLGLSDINK
AYIETLKQCFQLPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQPAVEPCEDSQVPDD
TYHCQHPPCRMHICEIDPSVAVGFFCRTEDDFDDWCMRIRKLSHTRGSLPMFELVDCQPS
HLACSVDVLNLTPDEAGIQSEVRCGQAHCTTDKAPFKGNFPDVRGDRVHGKIKFKKTADV
GSSGNHILNVYNTPFFMCLNPESGTLC
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagctactctcacgtacgacacacttggctttggagagtttgaagattttcca
gagacctcagagccggtgtggatcttggggaaagaattcaacgcactcacagaaaaggat
gacattctttcagatgtcacttcacgattatggttcacctacagaaaaaacttctcaccc
attggagggacagggcctacgtccgacacaggctggggctgcatgctgcgatgtgggcag
atgatcctaggcgaggccctggtctgcaggcatctaggccgagactggagatgggtgaga
ggccagcctcagcgaggacagtacatcagtatcctcaacgccttccttgacaagaaagac
agctactattctttacatcaaattgcccagatgggagtcggggaggggaagtctataggc
cagtggtacggaccgaacacagtggcacaggtactgaagaaactaactgtgtttgactcg
tggagtcgtctggcggtacatgttgctatggacaacaccgtggtgatggaggagatcaag
cggttgtgtatgccctggctggactatggtggagcagcgtgtgcagagcccccaggatgg
ataccgaagcataacggctgcctggagggggcctgtgccctggccgaggaggagacggct
ctctggaagcccctggtccttctcatccctctcaggctgggcctgagcgacatcaacaag
gcctacatcgagaccctgaagcaatgctttcagctgccccagtccctgggtgtcatcgga
gggaaacccaacagtgcccattacttcataggctatgttggagaggagttgatctacctg
gacccccacaccacccagcctgcagtagagccctgtgaggacagccaggtccccgacgac
acttaccactgtcagcatccgccgtgccgcatgcacatctgtgaaatagacccctccgtc
gcagtgggtttcttctgccgaacggaggacgacttcgatgactggtgtatgcgaatccga
aagttgtcccacactagaggaagcctgcccatgtttgagctggtagactgtcaaccatct
cacttggcctgctctgtagacgtgctcaacctcactccggatgaggctgggattcagtca
gaggtgcgttgtggacaagcgcattgcactaccgacaaagcgccttttaaaggcaatttc
cctgacgttcgcggagatcgcgttcacggtaaaataaaatttaaaaaaactgctgacgtc
ggctcaagtggaaatcacattttaaatgtctacaacacacctttttttatgtgcttgaat
cctgaatccgggacattatgttga
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