Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139416669
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Entry
139416669 CDS
T10872
Name
(RefSeq) IQ motif and SEC7 domain-containing protein 1 isoform X1
KO
K12495
IQ motif and SEC7 domain-containing protein
Organism
ocla
Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
139416669
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139416669
Membrane trafficking [BR:
ocla04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
139416669
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec7
IQ_SEC7_PH
SOS1_NGEF_PH
PH_19
RHG20_PH
PH_BUD3_C
Motif
Other DBs
NCBI-GeneID:
139416669
NCBI-ProteinID:
XP_071021719
LinkDB
All DBs
Position
9:complement(60809782..60870907)
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AA seq
1378 aa
AA seq
DB search
MRSSRRSFLLRRSNFCIVEAETRCVEPPGPHKDGPYSQTTAYLRGTERYSDISRCPGPPG
PRGLPCVAPPSSASLAWALRTRHQPASLALRKQEEEENKRCKASLSDSYELSTDLQDKKV
EMLERKYGGSFVSRRAARTIQTAFRQYRMNKNFERLRNSASESRMTRRIILSNMRLQYSF
DDRQAQQQGTGTQTNFTHSVGIGPPHSPDTERTGDYTHLEDSFSKQVKSLADSIDDALTC
RGGRDDSQEGSREGGGISDDFGECVWSSSSNPSSRRGLGERSRGGGGGLSMHGDSTATSY
SDVTLYMDDCMPSSPLSLDRAPSSTDTEYWGPRGGVGGREDSRDTEGGGSSNSRRSTPCT
ECRDYRLRGAHLPLLTIEPPSDSSVDTSDRSDRGSLSRQIYEQEPAGGAGSPQGTLKHSP
NTPRPVSTAAAQGQTRALGRGPPLPTHIPHHVAHHHHHHPHHHQYPDTPSSSSSPQQPPT
TPLSSSSSAALPPGGLEQPCLSDGDNDSLNSTTNSNETVNCSSGSSSQDSLREPLPPLGK
QTYQRESRHSWDSPPFNNDVVQRRQYRIGLNLFNKKPEKGIQYLIERGFVSDTPVGIARF
ILERKGLSRQMIGEFLGNRQKQFNKDVLDCVVDEMDFSGMDLDDALRKFQAQIRVQGEAQ
KVERLIEAFSQRYCVCNPTLVRQFQNPDTIFILAFAIILLNTDMYSPNVKAERKMKIEDF
IKNLRGVDNGQDIPRDLLVGIYQRIQKWELRTNDDHVSQVQAVERVIVGKKPVMSLPHRR
LVCCCQLYEVPDPNRPQRTGVHQREVFLFNDLLVVTKIFQKKKTSVTYSFRQSFPLVEMQ
VHMFQNSYYLHGIRLTSAVLGGDSKVLIVFMAPSQQDRTRFVSDLRESIAEVQEMEKYRV
ESELEKQKGVMRTGLLTGLVGGGVGVKGEVVNGTLGRPSLDDNYSAGEGLKRSALSSSLR
DLSDGGKRGRSNSVGSLDSTMEGSIISSPRTHQCYPVPGVIPGCYPTEDYRPHRPILSPG
TGVGGGPGQQQTAAGMGVGGVPSSVERAGVGSGPGGGNTGSFLGSLFGSKRAKPPSPLIP
PGPPYPAPVPPPTTGGPPPHSPSSLCQSEGGPSKIQALHAQYCHTAVVQPPPPYYHHHRY
HVQAGPPPLPGGGVPPHILQRGPLPCRPPFGPPHAQLQQLAHLSQFSQHGMQGRYGNIAV
GCPPPLSPHSQHSQNPQFTLYHTQTPQSIRGGAVPSKPPLTLSHSHPHPHAHSHTHPGHP
LSAAPHPTAHPHQSHFIFGTLPHQHQHQQPPASVNAHHATSAAQYQPQYPPLSSIPPPPP
HSPLPPPSIPLTPLTPLCPHPPQHPGQPQQGPQVTGAGATGTGVSSKSKPINRISTVV
NT seq
4137 nt
NT seq
+upstream
nt +downstream
nt
atgagatccagcaggagaagtttcctgctacgccggtctaatttctgcattgtggaagca
gaaacccgatgtgtggagccgccagggccccacaaagacggcccttacagccagaccaca
gcgtacctgcgtggcaccgagcgctacagtgacatcagcaggtgtcctggtcctccaggc
ccccggggacttccgtgtgtggcccctcccagctcggccagccttgcctgggcactgcga
acacgtcatcagcctgccagtctggccctccgcaagcaagaggaggaggagaacaagagg
tgcaaggccagtctctctgacagctatgagctctccacagacctacaggacaagaaggtg
gagatgttggagagaaagtacggtggctccttcgtgagccgcagagcagcccggaccatc
cagacggccttccgccagtaccgtatgaacaagaactttgagcgcctccgcaactccgcg
tccgagagccgcatgacacgacgcatcatcctgtccaacatgcggctgcagtactcattt
gacgaccgccaggcgcagcagcaggggaccggaacacagacgaacttcacacacagtgtg
ggtatcggccctcctcattcacctgacacagagcggacaggagactacacacacctagaa
gactccttctccaaacaggtaaagtccctggctgactccatagatgacgccctgacctgc
cgtggagggcgggatgactctcaagagggtagcagagagggcggaggcatcagtgatgac
tttggggagtgtgtgtggagcagcagcagtaacccctcatcccgcagaggcctgggtgag
agatctcgaggaggtggaggaggcctcagcatgcacggagacagcacagccacctcctac
agtgatgtcactctatacatggatgactgcatgccctcctcgcccctgtctctggaccga
gcccccagcagcacagacacagagtactggggccccaggggaggcgtggggggccgtgag
gacagcagggatactgagggagggggtagtagtaacagccgtcgcagcaccccctgcacg
gagtgtcgagactaccgtctaaggggcgcccacctgcccctgctcaccatcgagcctccc
agcgacagctccgtggacactagcgaccgttcagaccgtggctccctcagcagacagatc
tatgagcaggagccagcaggaggagcaggctctcctcagggaaccctgaaacactctcct
aacactccccgccctgtctccacagcagcagcgcagggccagacccgggcccttggccgg
ggcccccccctgcccactcacatcccccatcacgtggcacaccaccatcaccaccaccct
caccaccaccagtacccagacaccccctcgtcatcgtcctccccccagcagccccccacc
acccccctgtcctcctcctcctctgctgcgctgccccctggtggcctagagcagccctgt
ctgtctgacggggacaacgactctctcaactccaccaccaactccaacgagacggtgaac
tgcagctctggctcctcgtctcaggacagcctgagggagcccctaccccctctgggcaag
cagacctaccagagagagagtagacacagctgggactcaccgccattcaacaacgacgtg
gtgcaaagacgccagtaccgcatcggactcaacctattcaacaagaagccagagaaaggg
atccagtacctgatcgagagaggctttgtgtccgacactccggttgggatcgctcgcttc
atcctggagaggaagggcctgagcagacagatgattggagaattccttggtaaccggcaa
aaacagttcaacaaggacgtactggattgtgtggtggacgagatggatttctctgggatg
gacctggacgatgctctgaggaagttccaggcccagatcagagttcaaggagaagcccag
aaagtagagaggctcatagaggctttcagtcagcggtactgtgtgtgtaacccaacgctg
gtccgccagttccagaacccagacaccatcttcatcctggccttcgccatcatcctcctc
aacacggatatgtacagccctaacgttaaggcagagaggaagatgaagatagaggacttc
atcaagaacctcagaggagtggacaatggccaggacattcccagggatctgttggttggg
atctaccagcgcatccagaagtgggagctaaggaccaatgatgaccacgtgtctcaagtg
caggcagtggagagagtcatagtaggcaaaaagcctgtgatgtctctgccacaccgcagg
ctggtatgctgctgtcagctctatgaggtgcctgaccccaaccgaccccaaaggacagga
gttcaccaacgggaggtcttcctgttcaatgacctgctggtggtgactaagattttccag
aagaagaagacttctgtgacgtacagtttcagacagtccttccctctagtggagatgcaa
gtccacatgttccagaactcctactacctccacggtatccgcctgacctcagcagtgttg
ggtggggacagtaaggtccttatcgtgttcatggctcccagtcagcaggaccgcacccgc
tttgtcagtgacctgagagagagtatagctgaggtgcaggagatggagaagtacagagta
gagtctgagttggagaagcagaaaggggtgatgaggactggcctactgaccggcttggtc
ggaggcggagtgggggtgaagggtgaggtggtgaacggcaccctgggaaggcccagtcta
gatgacaactactctgcgggagagggactgaaacgctccgcactcagctcatctctccga
gacctatcagacggagggaaacgtggtcgcagtaacagtgttggctccctcgacagtacc
atggaaggttccatcattagcagcccccggacccaccagtgttacccggttccgggcgtg
atcccaggctgctaccctacagaagactaccggccgcatcgccccatcctgagccccgga
acaggggtggggggtgggccggggcaacaacagaccgctgctgggatgggagttggaggg
gttcccagcagtgtagagagagcaggagtggggagcggccctggggggggcaatacgggc
tccttcctgggctctctattcggcagcaaacgcgccaaaccgccaagtccccttatacca
ccggggccaccctaccccgcccctgtccccccacccactacgggagggccccctcctcac
tccccatcatctctgtgccagtcagaggggggcccttccaagatccaggccctgcatgct
cagtactgccacacggccgtcgtgcagccccctcccccctactaccatcaccatcgctac
cacgtccaagctggccctcctcccttgccaggcgggggcgtgccccctcatatccttcag
agagggccgctcccctgtcgccctccttttggcccccctcacgcccagctccagcagctg
gcccatctctcccagttttcccagcatggcatgcagggtcgctacggcaacatagcggtg
ggctgtcctccccccctttctcctcactcccaacattcccagaacccccagttcaccctg
taccacacgcagaccccacaatctatcaggggaggcgctgtgccaagcaaacctcctctg
actttgtctcactcccacccgcacccccacgcacactcccacacccaccccgggcaccca
ctcagtgccgcgccacaccccaccgcccacccacatcagtctcacttcatttttggcacg
ctgccccaccaacatcagcaccagcagccgcccgcctccgtcaacgcccatcacgctacg
tccgccgcccagtatcagccccagtaccctcctctctcttccatcccccctccccccccc
cactcccctttaccccccccttctatcccccttacccctcttacgcctctctgccctcac
cccccccagcaccccgggcagcctcagcaggggccccaggtgacgggggctggggcgact
ggcacaggggtcagctccaaatccaaacctatcaaccggatcagcacggtagtgtga
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