Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139416670
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Entry
139416670 CDS
T10872
Name
(RefSeq) G-patch domain and KOW motifs-containing protein-like
KO
K13101
G patch domain and KOW motifs-containing protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ocla03041
]
139416670
Spliceosome [BR:
ocla03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
139416670
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GFIT
Motif
Pfam:
GPKOW_C
G-patch_2
KOW
G-patch
KOW7_SPT5
KOW2_Spt5
Motif
Other DBs
NCBI-GeneID:
139416670
NCBI-ProteinID:
XP_071021724
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Position
9:60942453..60953958
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AA seq
507 aa
AA seq
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MASSQHEQYGSNVDTSTSSVQQLGDRKAGAVSFGFSKTLSKFKSSRDEDIDADERDYLTG
VDGKELLSTKPVEKPKELIIPLIQRNRWCSRQENKAGLVQGQGDGGRVKAKTQPPSQEQD
SVESQAVKEIIEESQRLLDQWKNGDQADPNLTIPLLMQNQAPQGFEDGDHIKVDLRPESS
TEADYDSVPVEAYGLAMLKGMGWKAGEGIGRTFKQDVKPIEHQLRPKGLGLGADRSSIRD
LEPSGPRRPPKPGDERKEETLVLGPGGHVLVESGAHKDLYGKIEGVDPDNARVMVKLAIG
SKTVTISQYALKLVDRTEYDKNCKDLSRLSRAHKEKEKEKERQRREEKERNNEDERKKDG
GKDQRKRKHRDSSQDREKPMAKLPPASSPWLQRDLKVRFVDKAFKGGRYYNSKMRIEDVL
TPNICVCRTEEGRFLDDVKQTMLETIVPKSDLDDIMVVLGEHRGQVGRILQRDRDRSRAM
VQLDRYEEKVFSLDYDSICHYVGGGDH
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtcgcaacatgaacaatacggcagtaatgttgatacttcaacatctagtgtt
caacagctaggagatagaaaagcaggggctgtatcttttggttttagcaaaactttaagt
aaatttaaatctagtcgggatgaagatatagatgcagatgagcgagattatttaacagga
gtcgatgggaaagaattgctaagtaccaagcctgtggagaagccaaaggagctgatcatt
ccactcatccaaaggaaccgctggtgcagcaggcaggaaaacaaagctggcctggtccag
gggcaaggtgatggaggaagggttaaagccaaaacacaacccccctctcaggagcaggac
tcagtggaatcacaggctgtcaaagaaattattgaagaatcccagaggctgcttgaccag
tggaaaaatggggaccaggcagaccccaacctcaccatccccctgctgatgcagaaccag
gctccacaggggtttgaggatggagaccacatcaaggtggacctgcgaccagagtcttcc
acagaggcagactatgacagtgttcctgtggaggcgtacgggttagccatgctgaagggg
atgggctggaaggcaggagaaggaattggacggaccttcaaacaagatgtgaagcctata
gagcaccagctgaggcctaagggtcttggtctgggagctgatcgctcttccataagagac
ctggagcccagtgggccccggaggccccccaagccaggcgatgagcggaaggaggagacc
ctcgtcctggggcctggaggccatgtgctggttgagtctggtgcacacaaggacctttac
gggaagatcgaaggggttgatccggacaatgcacgagtaatggtcaagctcgcaattggt
agcaagacagtgacaatcagtcaatatgcactgaaactggttgaccgcacagaatatgac
aaaaactgcaaagacctcagtcgcctaagcagggcccacaaagaaaaggagaaagagaag
gaacggcagagacgggaagagaaggaaaggaataatgaagatgagaggaagaaagatgga
gggaaggaccaaagaaaaaggaaacatcgggattcaagtcaggacagagagaagcctatg
gcaaaactaccccctgcttcatccccctggctccagagagacctgaaagttcgctttgta
gataaagctttcaaagggggaagatactacaattcaaagatgcgaatagaggatgtcttg
acgccaaacatctgtgtgtgtcgtactgaggaaggcagattcttagacgatgttaaacag
acaatgctagagaccattgtgccaaagagtgacttggacgacatcatggttgtactcggt
gaacacagagggcaggtgggccgtatcctccagagagacagagaccgaagcagagccatg
gtgcagctggacagatatgaggagaaagtcttctccctggactatgactccatctgccat
tatgtaggagggggagatcactga
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