Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139416682
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Entry
139416682 CDS
T10872
Name
(RefSeq) growth/differentiation factor 10-like
KO
K22674
growth differentiation factor 10
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
139416682
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ocla04052
]
139416682
Cytokines and neuropeptides [BR:
ocla04052
]
Cytokines
Transforming growth factors (RSTK binding)
139416682
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGF_beta
Motif
Other DBs
NCBI-GeneID:
139416682
NCBI-ProteinID:
XP_071021750
LinkDB
All DBs
Position
1:complement(58929543..58941148)
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AA seq
522 aa
AA seq
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MAVWFEFTAHMLFLMLGCCLGTLEGRTSSRTPWGLQGQGSDGTDSPFDRDRANQDVVSQH
MYRLYEKYNRDLKRLREGNTVRSFRASQDSSDQRTFYHLNLTSLQDSELILSATFHFLFD
RCPRPRAWLGKRYKIPACRSLHLHPAPYIHLFLHSNPSGSGFNPGSQVSLLGNMTFHPNQ
KGLWQMQDVTVAIKEAREKGSHFVSVELDFGLQYHRQPEDTLSGASLPYLLMYADDHALD
EPNSVAQTLQRYGPEAEVKENSSHPSRLPPKQGSKGRVRRGVPSHPDSIQNNELPEVEYR
PSGSRKDDLFETAYHTLKPINPKPGRKERMRTGQDGEEEVKDGERDGGSQSPVLSLDERT
PKKSSDRGSRLQDNIEGRSDERNDRGKAGGSKSPMLSFDEWTMRKAKKRQWGSEPQIRSC
SRRTLRVDFADIGWSEWVLAPEAFDTFYCAGTCGFPMPKVLHPSNHATIQSIVRAVGIVP
GVPEPCCAPEKMSPLVVLYQDEGGNLVLKVYPSMSVESCACR
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggcagtctggttcgagtttaccgcgcacatgctttttctaatgctaggttgttgtctt
ggaactttggagggtcggacctcgagccgaaccccatggggcttgcagggacagggcagc
gatggaactgattctccgtttgaccgagacagagctaatcaggatgtggtctcacagcac
atgtacaggctgtatgagaaatacaacagagatctgaaacgactcagagagggaaacact
gtcaggagtttcagagccagccaagactcgtctgaccagaggacgttttaccatctgaac
ctgacgtctctccaggactcagagctcatcctctctgccacgtttcacttcttgttcgac
cggtgcccacggccaagggcctggttgggcaaacgctacaaaatcccggcctgtcgctct
ctacacctccaccctgctccctacatccatctcttccttcactccaacccctctgggtca
gggttcaatccagggtcgcaggtgtcattgctaggcaacatgacatttcaccctaaccag
aaagggttgtggcagatgcaggacgtgactgtggcgataaaagaggccagggaaaagggc
agtcattttgtgtcggtggagctggactttggactgcagtaccacagacagccagaggac
acactgtcgggggccagtctaccttatttattgatgtatgctgatgaccatgcgctagat
gagcccaacagtgtggcacagactttacagaggtatggccctgaggctgaggtgaaggaa
aattcttctcacccttctcgtcttccccctaaacaggggtcaaagggtcgtgtaagaagg
ggggtaccatcccacccagactccatccagaacaacgagctaccagaggtggagtacagg
cctagcggatccaggaaagatgacctgtttgaaaccgcctaccacaccctgaaacctatc
aatcccaagcctgggaggaaggagaggatgaggaccggccaggatggagaggaagaagtg
aaagatggagagagggatggagggagtcaatcgccagttctgagcttggacgagaggacc
ccaaagaagagcagcgatagagggagtaggttgcaagacaacattgagggaaggagtgat
gaaagaaacgatagagggaaggcaggaggaagtaagtctccaatgctgagttttgatgag
tggacaatgcgcaaggcgaagaagagacagtggggatcggagccccagattaggagctgc
tctaggaggacactcagggtcgactttgccgacatcggctggagtgagtgggtcctggcg
cctgaagccttcgataccttttactgcgctggaacctgtggattccccatgcccaaggtg
ctgcatccctctaaccatgcaaccatccagagtatagtccgtgcggttgggatagttcca
ggggtcccagagccctgctgtgccccagagaagatgagccctctggtggttctctaccag
gacgagggaggtaacctggtgctcaaggtctaccccagcatgtctgtggagagctgtgcc
tgcagatag
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