Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139416741
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Entry
139416741 CDS
T10872
Name
(RefSeq) arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3-like
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
139416741
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139416741
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ocla04147
]
139416741
Membrane trafficking [BR:
ocla04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
139416741
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
139416741
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
139416741
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
ArfGap
PH
Ank_2
Ank
Ank_4
Ank_5
BAR
PH_11
TPR_TTI1_N
PH_21
Trypan_PARP
ALA1
Motif
Other DBs
NCBI-GeneID:
139416741
NCBI-ProteinID:
XP_071021877
LinkDB
All DBs
Position
9:64492200..64584652
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AA seq
848 aa
AA seq
DB search
MTVDFEECVKDSPRFRANIDEVETEVVEIEAKLDKLVKLCSGMIEAGKAYVSANKLFVNG
IRDLSQQCKKDEMISECLEKCGESLQEIVNYHMILFDQAQRSVKQQLHNFVKEDVRKFKE
TKKQFDRMREDMEIAQVKNAQAPRNKPHEVEEATGTLSITRKCFRHLALDYVLQINVLQA
KKKFEILDAMLSFMHAQYSLFQQGYNLLDEIDPYMKKLAAELDQLVIDSAMEKRDMEHKH
ATIQQRTLMQDFSYDDSKAELFNVDAPNGVVMEGYLFKRASNAFKTWNRRWFSIQNSQLV
YQKKLKDSLTVVVEDLRLCSVKPCEDIERRFCFEVVSPNKSCMLQAESEKLRLAWIQAVQ
ASIASAYRESPDYHYIECLDRTASPSVSSIDSASEPRERSVRGETILHRIQCLPGNEYCC
DCGQADPHWASINLGILLCIECSGIHRSLGVHCSKVRSLMLDSWEPELLKLMCELGNSVI
NHIYEGACEAQGLKKPGPSSSRQEKEAWIKSKYVEKKFLKKLGATEVLVNGGRKTEHRWS
VKKWQRHNSATTVPKTRRKYRQEPGSASPATLSSAASALERKFRRESLFCPDELDNLFSY
FDTGSGPRSPAGLSSDSGLGGSTDGSTDILVFGSVVDSVTEEECEVSEDSSGEAEMEPET
ETQSDPEDGRELHPGALLYKASQARNLPVMAEALAHGADINSVNDEDDRKNPLIQAVFGG
SLIACEFLLQNAADVNQRDARGRGPLHHATYLGHTGQVCLFLKRGATQNDEDEDGQDPLS
IAVQAANADIVTLLRLAKMNEEMRESEGPFGQPGDTTYLDIFREFSHMASHNPEKLKRRS
VHFRHSFR
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgacggtggactttgaagaatgtgttaaagattcaccccggttcagggcaaacattgat
gaagtggagacggaggtggtagagattgaagctaaactagacaagctggtgaagctatgc
agtgggatgatcgaggcagggaaggcgtatgtcagtgccaacaaactctttgtgaatgga
atccgggacctgtcccaacaatgcaagaaggatgagatgatctcggagtgcctggagaag
tgtggggagagcctccaggaaatagtcaactaccacatgattctgttcgatcaagcccag
agatctgtgaagcagcagctgcacaactttgtgaaagaggatgtccgtaagttcaaggag
accaagaagcaatttgaccgcatgcgtgaggacatggagatagcccaggtgaagaacgcc
caggctcccaggaacaagccccacgaggtggaggaggccaccggaacactcagtatcacc
aggaagtgcttcagacacctggccctcgactacgtacttcagatcaacgtccttcaagcc
aagaagaagtttgagatcctagatgctatgctgtcctttatgcatgcccagtactccctc
tttcagcagggctacaacctgctggatgagattgacccctacatgaagaagctggctgct
gagttggatcagttggtgattgactcggccatggagaagagggatatggaacacaagcac
gccaccatacagcagaggaccctcatgcaggacttctcgtatgacgactcaaaggcagag
ttgttcaacgtggacgcgcccaatggcgtggtgatggaggggtacctgtttaagagagcc
agcaatgcctttaagacgtggaacaggcggtggttctccatccagaacagtcagctggtc
tatcagaagaagctgaaggattccctgacggtggtggtggaggacctcaggctgtgctct
gtcaagccctgtgaggacattgagaggaggttctgcttcgaggttgtctcccccaacaag
agctgtatgctgcaggcggagtcagagaagcttcggctagcctggatccaagcagtgcag
gccagcattgcctcagcatacagggagagcccagactaccactacatcgagtgtctggat
aggacagcctcaccttccgtcagcagtatcgactcggccagcgagcctcgggaacgcagt
gtcaggggggagaccatcctgcatcgtatacagtgtctcccgggcaatgagtattgctgt
gactgtggccaggccgacccgcactgggcctccatcaacctgggcatcctgctctgcatc
gagtgctccggcatccacaggagtttgggggttcactgctccaaggtgcgctctctaatg
ttggactcatgggaacctgagttactaaagctgatgtgcgagctgggaaacagtgtcatc
aaccacatctatgagggagcatgtgaggcacagggcctgaagaaaccagggccctcaagt
tccaggcaggagaaggaggcgtggatcaaatcaaagtatgtggagaagaagttcctgaag
aagttgggggccaccgaggtgcttgtgaacggcgggcggaagacggagcaccggtggagt
gtgaagaagtggcagagacacaacagcgccaccacagtgcctaagacccgacggaaatac
cgtcaggagccgggcagcgcctcccctgccaccctctcctcagccgcttcagctctagag
agaaagttccgacgagagtcactgttttgtccagacgagctggacaatctcttctcttac
tttgacacaggatctggacctcgtagccctgcaggtctgagcagtgacagtggcctgggc
ggcagtacagatggcagcacagatatcctggtgttcggctcagtggtggacagtgttaca
gaggaggagtgtgaggtgtcagaggactctagcggagaggctgagatggagccagagacc
gagacccagtcggacccagaggatgggcgtgagctccaccctggggcgctgctctacaag
gcctcccaggcacgcaacctgcccgtcatggctgaggcgctggcccacggggctgacatc
aactccgtcaacgacgaggatgatcgcaagaacccactcatacaggctgtgtttgggggc
tccttgatagcctgcgagttcctgctccagaatgcagctgacgtcaaccaaagagacgca
agggggagggggccactacaccacgccacatatctgggacacacagggcaggtgtgtttg
ttcctgaagagaggagccacgcagaacgacgaggacgaagatggacaggaccctctgagt
atcgctgtgcaggcagccaatgcagacatcgtcaccttgttgcgactggccaagatgaat
gaggagatgcgggagtcagagggaccgttcggccagccaggagacactacttacctcgac
atcttccgagagttttctcacatggcctcccacaacccagagaagctgaagcggaggagt
gtacattttagacactccttcaggtag
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