Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139416770
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Entry
139416770 CDS
T10872
Name
(RefSeq) cyclin-T1-like isoform X1
KO
K15188
cyclin T
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03250
Viral life cycle - HIV-1
Brite
Transcription machinery [BR:
ocla03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Super elongation complex (SEC)
139416770
Brd4/P-TEFb complex
139416770
7SK RNP complex
139416770
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139416770
NCBI-ProteinID:
XP_071021927
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Position
9:66259784..66272338
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AA seq
692 aa
AA seq
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MAASFPSPSGTNNKWYFTREQIENSPSRRVGLDPDKELSYRQQAANLLQDMGQRLNVSQL
TINTAIVYMHRFYMIQSFTRFHRNVIAPATLFLAAKVEEQPRKLEHVIKVTHACLNPQDP
SPDVRSDAYLQQAQDLVILESIILQTLAFEITIDHPHTHVVKCTQLVRVVPASKDLAQTS
YFMATNSLHLTTFCLQYSPPIVACVCIHLACKWSNWEIPVSTDGKHWWEYVDNTVTLELL
DELTHDFLQILEKTPSRLKRIRNWKAAGQTVKGGKSKVPEDGDQTDCMMSMISMSSSETT
LASLSNPSSSSMAPILLELKSTLGSGSDQPNHVELHAPAKVSLSEYRAKHADVLAAQKRK
LENMEASVKREYASAAQALIGQHQRKEKYHRDQLQSSSHHSSLASSDLSSPSPIILKIPL
EKERGERSSLKMRLPLGTGGGGGHSGGGNRGAGGEQDIKVRIRVPEKVRSAGSGEEGGKS
REGKHRDRSHHHHHHHHHHSSSSLSGASVSSSSSHKHSASAAGAVGGSGSKKTPSDSSRM
SSSSASRKRTHSTESQGSHPSKVSKSSRNSAYQLPALLAASSAHSLGAQTAEILPSLGLP
SLHQGNFSHSKGDKTDTNGHNAGGGSQSNEYQDTFEMLNSLLSAQGVQPAQPPMFDYRSQ
YGEYRYSGGSRGGSRPPPLPAEPPPPLPPLPK
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggcggcttcgttcccttctccttctggaacaaacaacaaatggtacttcacccgagaa
cagatcgagaatagcccatctcgtcgtgtgggacttgatccagacaaggaattatcatac
agacagcaagccgcgaaccttctacaggacatgggacagcgactcaatgtgtcccagcta
acaattaatactgctattgtgtatatgcaccgattctacatgatccagtccttcaccagg
ttccacagaaatgtcatagctccagcgacactgttcctggctgcaaaggttgaggaacag
ccccgcaagttggagcatgttatcaaggtgacccatgcatgcctcaaccctcaggaccct
tcaccagacgtccgcagtgatgcttacctgcaacaagcccaagacctggtcattcttgag
agcattatactccagaccctggcttttgaaatcaccattgaccacccacatactcatgtt
gtcaagtgcacccagctggtcagagttgtcccagcgagtaaggatttggcccagacctca
tacttcatggctaccaacagcctacacctgaccacattctgcctgcagtacagcccaccc
atagtggcctgtgtctgcatccacctggcttgcaagtggtccaactgggagatccctgtc
tccacagacggcaagcactggtgggagtatgtggacaatactgtcacccttgagctgctg
gatgaactcactcacgacttcctacagatcttggagaagacaccaagccgattaaaacgc
attcgcaactggaaagcggcaggtcagacagtgaagggagggaagtctaaggtgccagag
gacggggaccagacagattgtatgatgagcatgatctccatgtcgtcctctgagaccacg
ctggccagcctctccaacccttcctcttcatccatggctcccatactactggagctcaag
tcgaccctgggcagtggctccgaccagcccaaccacgtcgagctgcacgccccagccaag
gtgtcactgagtgagtaccgggccaagcacgctgatgtcctggctgctcagaagaggaag
cttgagaacatggaggccagcgtgaagagggagtatgcctcggcagcccaagctctgata
ggccaacatcagaggaaggagaagtaccaccgtgatcagctgcagtccagctcccaccat
tccagcttagcctcctctgacctcagcagcccctcgcccatcatcctcaagatccccctg
gaaaaggagaggggcgagcgcagctccctgaagatgcgcctccctctggggactggggga
ggaggggggcacagtggaggagggaacagaggagccggaggagaacaggacatcaaagtg
agaatccgggtgcctgagaaagtacgcagtgcaggctcgggagaggaggggggcaagagt
agggagggcaagcatcgagatcgctcccaccaccaccatcaccaccaccaccatcattca
tcgtcgtctttgagcggtgcttccgtctcttcgtcctcgtcacataaacactcagccagt
gctgctggagctgtaggaggaagtggtagcaaaaagacccccagtgactcatctagaatg
agctcctcctctgcttctcgaaagaggacacactccactgagtcccagggatcccacccg
tccaaagtctctaagtcctccaggaactcagcctaccagctacctgctctgttagctgcc
tccagtgcacactccctgggggcgcaaactgctgagatcctcccatccctgggtctcccc
tccctccaccagggaaacttctctcactccaaaggggacaagactgacactaacggacac
aatgcaggcgggggaagccagtcaaatgagtaccaggacacatttgagatgctgaactct
ttactgagtgctcagggggtccaaccagctcagcctcccatgtttgactaccggtctcag
tacggggagtacagatacagtggagggtcgagggggggctctcgaccgccacccctgcct
gctgaacctccacccccgctaccccctttacccaaatga
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