Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139416775
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Entry
139416775 CDS
T10872
Name
(RefSeq) tubulin alpha chain
KO
K07374
tubulin alpha
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04145
Phagosome
ocla04210
Apoptosis
ocla04530
Tight junction
ocla04540
Gap junction
ocla04814
Motor proteins
ocla05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
139416775
09143 Cell growth and death
04210 Apoptosis
139416775
09144 Cellular community - eukaryotes
04530 Tight junction
139416775
04540 Gap junction
139416775
09142 Cell motility
04814 Motor proteins
139416775
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
139416775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocla03019
]
139416775
03036 Chromosome and associated proteins [BR:
ocla03036
]
139416775
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocla04812
]
139416775
04147 Exosome [BR:
ocla04147
]
139416775
Messenger RNA biogenesis [BR:
ocla03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
139416775
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
139416775
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
139416775
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
139416775
Exosomal proteins of other body fluids (saliva and urine)
139416775
Exosomal proteins of colorectal cancer cells
139416775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
139416775
NCBI-ProteinID:
XP_071021940
LinkDB
All DBs
Position
9:66218998..66221617
Genome browser
AA seq
451 aa
AA seq
DB search
MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RIRKLADQCTGLQGFLVFHSFGGGSGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVSEITNACFEPAN
QMVKCDPRHGKYMACCLLFRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAVAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGVDSIEGEGEEEGEEY
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgtatctctgtccatgtgggtcaggctggagtccagattggcaatgcctgc
tgggaactctactgcctggagcatgggatccagccagacggacagatgcccagcgacaaa
accatcggcggaggagatgactccttcaacaccttcttcagtgagactggggctggaaag
catgtccccagggctgtgtttgtggacctggaacccacagtcatcgatgaggtgcgcact
gggacctatcgccagttattccatcctgaacagctcatcactggcaaagaagacgctgcc
aacaactatgctcgtggacactacactattggcaaagagatcatcgacctggtgctggac
aggatccgcaaactggctgaccagtgcacaggccttcagggcttcctggttttccacagc
tttggaggtggctccggctctggtttcacttccctgctgatggagcgcctgtctgttgac
tacggcaagaagtccaagctggagttctccatctacccagctccccaggtgtccacagct
gtggtggagccctacaactccatcctgaccacccacaccaccctagagcactctgactgt
gccttcatggtggataatgaggctatctatgacatctgccgtaggaacctcgacattgag
cgtcctacttacaccaacctcaacaggctcattagccagatcgtttcctccatcactgct
tcccttcgatttgatggtgccctcaatgttgatctgacagagttccagaccaacttggtg
ccctacccccgtatccatttccctctggccacctatgccccagttatttctgcagagaag
gcttaccatgagcagctctctgtctctgaaatcaccaatgcctgctttgagccggccaat
cagatggtgaaatgtgaccctcgccacggcaagtacatggcttgctgccttctattccgt
ggtgacgtggtgcccaaagatgtcaatgctgccattgccaccatcaagaccaagcgttcc
attcagtttgtcgattggtgcccaactggtttcaaggttggcatcaactatcagcctccc
actgtggtccctggtggagacctggccaaagtccagagggctgtgtgcatgctgagcaac
accactgctgtggcagaggcctgggctcggcttgaccacaagtttgacctgatgtacgcc
aaacgtgcctttgtgcactggtatgtgggtgagggtatggaggagggagagttctctgag
gccagagaggacatggcagccctggagaaggattatgaagaggtaggggttgactccatt
gagggtgagggagaggaggagggagaagagtattga
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