Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139416776
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Entry
139416776 CDS
T10872
Name
(RefSeq) tubulin alpha-1C chain
KO
K07374
tubulin alpha
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04145
Phagosome
ocla04210
Apoptosis
ocla04530
Tight junction
ocla04540
Gap junction
ocla04814
Motor proteins
ocla05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
139416776
09143 Cell growth and death
04210 Apoptosis
139416776
09144 Cellular community - eukaryotes
04530 Tight junction
139416776
04540 Gap junction
139416776
09142 Cell motility
04814 Motor proteins
139416776
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
139416776
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocla03019
]
139416776
03036 Chromosome and associated proteins [BR:
ocla03036
]
139416776
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocla04812
]
139416776
04147 Exosome [BR:
ocla04147
]
139416776
Messenger RNA biogenesis [BR:
ocla03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
139416776
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
139416776
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
139416776
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
139416776
Exosomal proteins of other body fluids (saliva and urine)
139416776
Exosomal proteins of colorectal cancer cells
139416776
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
139416776
NCBI-ProteinID:
XP_071021941
LinkDB
All DBs
Position
9:complement(66208222..66211435)
Genome browser
AA seq
449 aa
AA seq
DB search
MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVSEITNACFEPAN
QMVKCDPRHGKYMSCCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKIGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAVAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGRDSGEGDEDGEEY
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgcatctccgtccacgtgggtcaggctggagtccagattggaaatgcctgc
tgggagctctactgcctggagcatgggatccagccagacggacagatgcccagtgacaaa
accattggaggaggagacgactccttcaacaccttcttcagtgagactggggctggaaag
catgtccccagggctgtgtttgtggacctggagcccacagttattgatgaggtgcgcact
gggacctatcgccagttattccatcctgaacagctcatcactggcaaagaggatgctgcc
aacaactacgctcgtggacactacactattggcaaagagatcatcgacctggtgctggac
aggatccgcaaactggctgaccagtgcacaggccttcagggcttcctggttttccacagc
tttggaggtgggaccggctctggtttcacttccctgctgatggagcgcctgtctgttgac
tacggcaagaagtccaagcttgagttctccatctacccagctccccaggtgtccacagct
gtggtggagccctacaactccatcctgaccacccacaccaccctagagcactctgactgt
gccttcatggtggataatgaggctatctatgacatctgccgtaggaacctcgacattgag
cgtcctacttacaccaacctcaacaggctcattagccagatcgtttcctccatcactgct
tcccttcgatttgatggtgccctcaatgttgatctgacagagttccagaccaacttggtg
ccctacccccgtatccatttccctctggccacctatgccccagttatttctgcagagaag
gcttaccatgagcagttaactgtctctgagatcaccaatgcctgctttgaaccagccaac
cagatggtgaaatgtgaccctcgtcacggaaagtacatgtcatgctgccttctataccgt
ggtgacgtggtacccaaagatgtcaatgctgccattgccaccatcaagactaaacgttcc
attcagtttgttgactggtgcccaactggtttcaagattggcatcaactaccagcctccc
actgtagtccctggtggagacctggccaaagtccagagggctgtgtgcatgctgagcaac
accactgctgtggcagaggcctgggctcgtcttgaccacaagtttgacctgatgtacgcc
aaacgtgcctttgtgcactggtatgtgggtgagggtatggaggagggagagttctctgag
gccagagaggacatggcagccctggagaaggattatgaagaggtgggacgtgacagcggt
gaaggagatgaggacggggaagagtattag
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