Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139416815
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Entry
139416815 CDS
T10872
Name
(RefSeq) calcium-binding and coiled-coil domain-containing protein 1-like
KO
K25828
calcium-binding and coiled-coil domain-containing protein 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ocla03021
]
139416815
04131 Membrane trafficking [BR:
ocla04131
]
139416815
Transcription machinery [BR:
ocla03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
Others
139416815
Membrane trafficking [BR:
ocla04131
]
Autophagy
ER-phagy
ER-phagy recepters
139416815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CALCOCO1
SKICH
SOAR
Motif
Other DBs
NCBI-GeneID:
139416815
NCBI-ProteinID:
XP_071021995
LinkDB
All DBs
Position
9:66983723..67005585
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AA seq
658 aa
AA seq
DB search
MEKAWRVEFRNVGSSYFPQSRVECHYSVSSQHTWASHDWVGLFKVGWSSVKDYHTFVWAL
APAGYQEGTDVNCCVHFQASYLPKPSSQQYQFVYVDGKGEVCSASPQFTFSAPKPLEDLV
TLEEGAHGEEGGTDMLLVVPRAELLQSRLQECLRERAELIHAREGAERMKQREKEKYGKA
REAWDRGREQLERNISELKEELQESRDRMEEMERRQEQVEASGEALAQEKSSILAKKAAN
KQRIRELEDDIKALTLKAVERETELERMKERDKKQAVQMMEDEKERNVLQLKLEQTEGEL
RSLSAEFQGLRSSLAQRDTHALQLRDTITTLTHRLNMAQRKEAESEASLAEMWGLRERQG
ASERGAEGLKEELCALVAQRDQGQTELHQARLQAAQLTLQLADASLTLREGRAHWAQERQ
SLQRTTSKDRERLEKLIGEMQRIEEKLQEERMEREKVEVELGREKDCNRVQLSETRRELQ
ELKASLRVAQKEKEELLLEKQDLMEYMRQVEQRMEAVADAKWSAAVFAPTSLPDSSLSDS
EDENPEALQPPRQPALSSRPLAHYSLCDPQAQPDSLLPSTPPSSPRDMSRPLSRGGVVIS
QPAPLSLPRQSGDTLTHSSDSEEEGDTALCGGHSSGDETALLLPETTVLSDLADTAQW
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggcttggagggtggagtttaggaacgtgggtagtagctacttccctcagagc
cgcgtggagtgccactacagtgtcagctcacaacatacctgggccagccatgactgggtc
ggactcttcaaggtgggatggtcgtcagtgaaagactaccacacctttgtctgggccctg
gcgccggcaggctaccaggagggcacagatgtcaactgctgtgtccatttccaggcctcc
tacctgcccaagcccagttcccaacagtaccagtttgtgtacgtggatgggaagggagag
gtgtgctctgccagcccccagtttaccttcagtgcccccaagcctctggaagacctggtc
accctggaggaaggagcccacggagaggagggagggactgacatgctgctggttgtaccc
agggctgagctactgcagagtcgcctgcaagagtgtctgcgtgagcgggccgaattgatc
catgcacgggagggggcagaaaggatgaagcagagagagaaggagaagtacgggaaggcg
agagaggcttgggacagaggacgtgagcagctggagaggaacatctctgagctgaaggaa
gagctgcaagagagcagagacaggatggaagagatggagaggaggcaggagcaggtggag
gcatcaggggaggccttggctcaggagaagagttccatactggccaagaaagcagccaat
aaacagcgaatcagagagctggaggatgacattaaagcgctaactctgaaagctgtggaa
cgagagactgagctggagaggatgaaggagagggacaaaaagcaagcagttcaaatgatg
gaggatgagaaagagaggaacgttctgcagctcaagctggagcagaccgagggggaactc
cggagcctgtctgctgagttccagggtctgaggagctccctggcccagagagacacacat
gccctgcagctacgggataccatcaccaccctcacacacagactcaacatggcacagagg
aaagaggcggagagcgaggcctccctggctgagatgtggggcctgcgggagcgtcagggg
gccagcgagcgtggtgctgaaggcctgaaggaagagctgtgtgctctggtggcccagagg
gaccagggccagacagagctgcaccaggccaggctccaggcggcacagctcaccctgcag
ctagctgacgccagcctgactctgagggagggcagagcacactgggcccaggagagacag
agcctgcagcgtaccacttcgaaggacagagagcgtctggagaagctgattggagagatg
cagcggattgaggagaagcttcaggaggagaggatggagagagagaaggtggaagtggag
ctgggaagagagaaggactgtaaccgggtacagctgagtgagacacgcagggagctccag
gagctgaaggccagtctgagggtggcccagaaggagaaggaagagctgctgctggagaaa
caggacctgatggagtacatgcgtcaggtggaacagaggatggaggctgtggcagacgcc
aagtggagcgctgcagtgttcgcccccaccagtctccctgacagttctctgtctgactct
gaggatgaaaaccctgaggccctgcagcccccccgccagcccgctctgtcctcccgccct
ctggcccactacagcctatgtgacccccaggcccagcctgactccctactcccctccacc
cccccttcctcccccagggatatgtcacggcccctctcccgagggggtgtagtcatcagc
cagcccgcccccctttcgttgccaaggcaatcaggagataccctgacacacagctctgat
tcggaggaggagggtgacacagccctatgtggaggacacagctctggagacgagacagct
ctgctgctgcctgagaccactgtcctcagtgacctggctgataccgctcagtggtag
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