Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139416833
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Entry
139416833 CDS
T10872
Name
(RefSeq) rho guanine nucleotide exchange factor 25-like
KO
K20690
Rho guanine nucleotide exchange factor 25
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139416833
Membrane trafficking [BR:
ocla04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
139416833
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
SH3-RhoG_link
PH
PH_19
PH_10
IQ_SEC7_PH
Motif
Other DBs
NCBI-GeneID:
139416833
NCBI-ProteinID:
XP_071022031
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All DBs
Position
9:68028198..68112853
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AA seq
734 aa
AA seq
DB search
MPATGGQSSSARGTSLKGGHLHRGCACQHLFRKVLIKCGCCYAWVRDSYSAAGSEGSIST
SVASLPPTLTVSCSSAPSSPGSRRSVSTMKKWLTNPVRKLSAGAVNISASSKGERQVRKL
DGGSKSPPPIPPSRHSHDLGLGLGLGLGLGGLGLVRLLGSEDHLTTILPITHKEMECRYR
LASPEELSSATLNSPSYLSDSLQGCIALAYTQDTQSTNVYPDGHTVLMNNTPSQSSAADS
EEERRSALEKSMYVLKELLETEKVYVEDLGCIVEGYMVTMTSKGIPADMKGKDKIVFGNI
HQIFDWHKDYFMGELEKCIAEPERLAQLFIKHERRLHMYVVYCQNKPKSEHIVSEYIETY
FQELRQHLGHRLQLNDLLIKPVQRIMKYQLLLKDFLKYYTKAGMDTEELEKAVEVMCFVP
KRCNDMMNVGRLQGFEGKITAQGKLLQQDTFTVMEQDSSFLSRAKERRVFLFEQLVIFSE
PIDRKKGFSLPGYTFKSSIKVSCLGVEAPVEGEVDRLVLTSRGTDGSVVRYVLQAASPEV
CRAWVHDVGQILETQRNFLNALQSPIEYQRRESNSKSNSLGRSMRAPLSAASGPLRPHSS
ASIDRQCLPCLLSYNTSLPTLYLPSQGGTCPQGHGETNTPQESPLVSRNSQTTVSQSHIQ
LAFTEQSGLSHYSRTQTPLQCEAVSNGLYSTQRAGEGCRSRALPGEAGPPPVSIPGPSAG
RRSSNLAQLNEDDL
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccactggtggccagtcatccagcgccaggggtacatcattaaaagggggccac
ctccacaggggctgtgcctgccaacacttattccgtaaagtcctgatcaagtgtggctgc
tgctatgcctgggtcagagactcatactcggctgcaggcagcgagggtagcatctccacc
tccgtggcgtccctgcctccgaccctgacggtttcctgtagctccgcccccagctcccca
ggctcgcgacgttccgtaagcaccatgaagaagtggctgaccaatccagtccgcaagctc
agcgctggggccgtcaacatctcagccagctccaagggggagcggcaggtcaggaagttg
gatgggggaagcaaatcccctcctcctattcccccttctaggcacagtcatgacctgggc
ctgggcctgggcctgggcctgggcctgggagggctggggcttgtcagactcctaggatca
gaggaccacctcaccactatactacccatcacacacaaagagatggagtgcaggtatagg
ttggccagtcctgaggagctttcctcagcaaccctaaactctcccagctacttgtctgac
tcactacagggctgtattgcacttgcctacacacaggatactcagtccaccaatgtctat
ccagatggacacacagtattgatgaacaacacccccagccaatcatcagcggctgacagt
gaggaggagaggaggagtgccttagagaagagcatgtacgtgctgaaggaactcctagag
acagagaaagtgtatgtggaagacctggggtgcatagtagagggctacatggtcactatg
actagtaaaggtataccagccgacatgaagggaaaagacaagatcgtgttcggaaacatt
catcaaattttcgactggcataaagactacttcatgggcgagctggagaaatgtatagca
gaaccagagagactggcccaacttttcataaagcatgagaggcgtctccacatgtacgtg
gtttattgtcagaataaacccaagtcggaacatattgtctctgaatacatcgagacctac
ttccaggagctgagacaacatctgggtcacagactacaactcaacgacctgctgatcaaa
ccagtccagaggatcatgaagtaccagctgctgctcaaggacttcctcaagtattacacc
aaagctgggatggacacagaagaactggagaaagcggtagaggtgatgtgctttgtgccc
aaacgctgcaatgacatgatgaacgtgggacgcctgcagggctttgagggtaagatcacg
gcgcaggggaagctgctccagcaggacaccttcacagtgatggaacaggacagcagcttt
ctgtcccgagccaaggagaggcgggtcttcctgtttgaacagctggtcatcttcagcgag
ccaatcgacaggaagaaagggttctcacttcctggttacaccttcaagagcagcatcaag
gtgagctgtctgggtgtggaggctccagtggagggggaggtggatcgcctggtgctgacg
tcacggggaactgatgggagcgtggtacgctatgtgctgcaggccgcctccccagaggtc
tgcagggcctgggtccatgatgtgggacagatcctggagacccagaggaacttcctcaat
gccctccagtctcccattgagtaccagcggagggagagtaacagcaagtccaacagcctg
ggccggagcatgagagcccccctgtctgcggccagcggccccctgcgcccccactcttca
gcctccatcgaccgccagtgcctgccctgcctcctgtcgtacaacacctccctccccact
ctctacctgcccagccaggggggaacctgcccccagggacatggcgaaacaaacacaccc
caggagtctcctctggtcagtaggaactcccagacaacagtctctcagtctcacatccag
ctagccttcactgagcagtctggcctgtctcactactccaggacccaaacccccctgcag
tgcgaagctgtgtccaacgggctgtatagcacacagagagcaggagagggctgccgtagc
agagcgctgcctggtgaggctggacctcctcctgtatccatccctggtccctcggctgga
cggcgctccagcaacctggcccagctcaatgaagatgacctatga
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