Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139416851
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Entry
139416851 CDS
T10872
Name
(RefSeq) neural cell adhesion molecule L1-like
KO
K06550
L1 cell adhesion molecule
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04514
Cell adhesion molecules
Brite
Cell adhesion molecules [BR:
ocla04515
]
Immunoglobulin superfamily
L1 family
139416851
CD molecules [BR:
ocla04090
]
Proteins
139416851
Lectins [BR:
ocla04091
]
I-type lectins (Siglecs)
139416851
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139416851
NCBI-ProteinID:
XP_071022088
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Position
9:complement(68646301..68781615)
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AA seq
1278 aa
AA seq
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MPHTQQHQVGSRGRRPHLLLHPILLLPLFSLLLSHAPQLSQGAIHIPSNFKKPPVITTQP
ESITVFGAEDILLTCEASGNPPPDFRWTKDGEEFIPANDPGLSVSPGSGTFMKTGVVSGP
MSQYKGKYSCYAENALGTAVSNEVQLITENTPALQKEQKVKKKVEEGESVVLKCNPPFST
VPPVIHWMDERMHHIELNDRVTQGRDGNLYFSHVTVDDTRIDYTCNAQYLSARTILSKEP
ITMTVTTSNSVVRSRRPQMMRPSGSHSTYHALRGQSLELECIVQGLPTPTVQWVRKDGQL
SESRTSRHLFDRLLRISNISDSDGGEYQCSVNNSQGKVTHTYTVSVEAAPYWTKEPVSQL
YAPGETVRLDCQADGIPSPAVAWSINGKPITGIDPTPRRTVRDGALILRDVVFTDTAVYQ
CQAHNKHGTILVNTYIFVIELPPQILNADGQKYNFTEGQKAVLQCQTFGSPRPKVTWERN
SSASLLAEPRVNLLTNGNLQITNVSHGDEGLYTCSVSNTNLSINADLDVLNRTVILSPPG
SLLVQPGKTAIFTCLAQVDPKLTPPHIQWKRSGQELFQSYAEDKYTFEGPDLIVANVQTE
DEGVYTCEVITNLDRVEASGSIIIVDRPDPPTQLQVSDPKDRNVTLSWTAGDDHNSPVIM
FVVEFEDGDSKERGWEELKRVSGTHESVTISLQPYVSYRFRVISINNIGKSDPSMPSDLH
STPPQAPDNNPENVRSESTDPDTLVITWEEMDRRVFNGPEFHYKVFWKRVAGDTTWYSNV
STEPPYIVTEVGNFSAFQIKVQAANQKGEGPELDPVTGYSGEDFPLKAPQNVAMVLLNSS
AIRVTWEPVNEKTVRGHLLGYKIHLLRFGSRGHHQGRRAREPDTSVEVETGPKEEKRVLG
GLRPYSHYTLTVTVFNSKGEGPPSKTLSFETDEGAPGPPMSLRLDSHAGTEMTLHWTPPA
QPNGVLKGYLLQYQIVKSDSPMQVETIDDHKVTHLTLKQLDPHSRYRFYLRGRTSAGDGE
PITREGATTLDGAPPSNISLYVGEKSVNLSWVPGQRQRSVSFQVQYLNKQDGGKWKQSEK
LNSSASFYQLKGLTPGSQYRLRFTFSNNTFWETEITTKGAGVMDMQTGFATQGWFIGLVS
AIVLLLLVLLILCFIKRGKGGKYSVKDKEEGQVDSEARPMKDETFGEYRSLESDNEEKRT
ASQPSLCDESKLCISDDNLDGYNNGSIAVTEVTMEDSLVSQYSRPSEATPDPGTLQDSSP
LNPNTTTNGLPNSAAILD
NT seq
3837 nt
NT seq
+upstream
nt +downstream
nt
atgcctcacactcagcaacatcaggttggcagtagggggcgacgcccccatctcctcctc
caccctatcctcctcctccctctcttctctctcctcctatcccacgccccccagctcagc
caaggagccatacacataccttctaactttaagaaacccccagtgatcaccacccagcct
gagtccatcactgtgttcggtgctgaagacatcctcctgacctgcgaagcatcagggaac
cctcctcccgatttccgctggactaaagatggggaagaatttatccctgccaatgacccg
ggcctgtcggtgtctccgggttctggaaccttcatgaaaaccggggtggtgtcaggcccc
atgagccaatacaagggcaaatacagctgctacgctgaaaacgcattaggaactgctgtg
tctaacgaggtccagctcatcactgagaataccccagccctgcagaaagagcagaaggtg
aagaagaaggtggaggaaggagagagtgtggtactgaaatgtaaccctcccttcagcact
gttcctcctgtcatccactggatggacgagcgaatgcatcacattgagctaaatgatcgt
gtaacccagggccgggacgggaacctatacttctctcacgtcaccgtcgatgacacccgt
attgactacacctgtaacgcccagtacctcagcgctcgcaccatcctctccaaggaaccc
atcaccatgactgttacaacctctaactcagtggttcggagccgaaggccccagatgatg
aggccctcggggagccacagcacttaccacgccctccggggccagagcctggagctagag
tgcatcgtccagggcctccctacccctacagtccagtgggtgaggaaggacggtcagctg
tccgagtcccgtacgtccagacatctgtttgaccgtctgctgcgcatcagtaacatctca
gatagcgacgggggagagtaccagtgttcagtcaacaactcacagggcaaggtcacacac
acctacaccgttagcgtcgaagcggctccatactggaccaaggagccagtaagccagctc
tatgccccaggagagacggtgagactggactgtcaggctgatggcatcccgtctcctgct
gtcgcctggagcatcaacggaaaacccatcacaggcatagacccaacccctaggcgtact
gtgagagatggagctctgattctgagagatgtggtcttcactgatacagcagtctaccag
tgtcaggcccacaacaaacacggaaccatcctagtcaatacctacatcttcgtcatcgaa
ctgcctcctcagatcctgaatgctgacggacagaagtacaacttcacagagggacagaag
gctgtactgcagtgtcagaccttcggctctcccagacctaaagtaacatgggagaggaac
agcagcgcttctctactggctgagcccagggttaacctgctgaccaatggaaacctccag
atcaccaacgtctcccacggcgatgagggcctgtacacctgctccgttagcaacaccaac
ctgtcaatcaacgctgacctggatgtgctgaacaggacagtgatcctgtctcctcctggg
tctctgcttgttcagcctggtaagacggccatctttacctgcctggcacaggtggacccc
aaactgacccctccgcacattcagtggaagaggagcggacaggaactctttcagtcatac
gccgaggacaagtacacatttgagggcccagacctgattgtggccaatgtgcagacagaa
gacgagggtgtttacacctgtgaggtcatcaccaacctggacagggttgaggccagcggg
tccatcattatagtcgaccgtccagacccccccacccagctccaggtctctgaccctaag
gaccgcaatgtcaccctgagttggaccgcaggagatgaccacaacagccctgtcataatg
tttgtggtggagtttgaagatggtgactctaaggagcggggttgggaggagctgaagaga
gtcagtggaactcatgagagcgtgaccatttctctgcaaccatacgtgtcctaccgcttc
cgggtcatctccatcaacaacatcgggaagagtgaccccagcatgccctctgaccttcac
agcaccccacctcaagctccagacaataacccagagaatgtgaggagtgagtctacagac
ccagacaccctggtcatcacatgggaggagatggacaggcgtgtgtttaacggcccagag
ttccactacaaggtgttctggaaaagggtggcaggtgacacaacctggtactctaatgtc
tccactgagccaccgtacatcgtcactgaagtgggcaacttctccgcatttcaaatcaaa
gttcaggctgccaatcagaaaggagagggacctgagctagaccctgtgactggttactct
ggagaggacttccccctgaaggctcctcagaatgtggctatggtgctgctcaacagttca
gccatcagggtgacatgggaaccagtgaacgaaaagactgtcagaggacacctgctggga
tataagatccacctgctgaggtttggctcgaggggccaccaccaaggccgtagggctaga
gagccagacaccagtgttgaggtggagacagggcccaaagaggagaagagagtcctgggg
ggactcagaccctactctcactacaccctcactgtcactgtgttcaacagcaagggagag
ggccccccctccaagaccctgtcctttgaaactgacgagggagctcctggccccccgatg
tccttacgcctggacagccatgcaggcacagagatgaccctacactggacacctcctgcc
caaccaaatggagttctcaaaggatacctgctgcagtaccagatcgtaaagagtgacagc
ccgatgcaggtggagacgatagacgatcacaaggtcactcacctgaccctgaagcagttg
gaccctcacagccgctaccgcttctacctgagggggcgcacctcggccggggacggagag
cctatcaccagggagggagctaccacactggacggagctcctccgtccaacatcagcttg
tatgtaggagagaagtctgttaacctgagctgggtgccaggccagagacagaggagtgtg
agcttccaggtccagtacctcaacaagcaagacggtgggaagtggaagcagtctgagaag
ctgaactcgtctgcatcattctaccagctgaaaggtctgaccccggggtcacagtaccgc
ctcagattcaccttcagcaacaacaccttctgggagactgagatcaccacaaagggagca
ggggtgatggatatgcagacaggctttgctactcagggctggtttattgggctcgtgagc
gccatcgtgctgttgctgctggtgctgctcatcctctgctttatcaagaggggcaaaggg
ggaaagtattcagtcaaagataaggaggagggtcaggtagactctgaggcgcgcccaatg
aaggatgaaacattcggagagtacagatctcttgagagtgacaacgaggagaagcggaca
gccagccagccgtctctgtgtgatgagagcaaactgtgtatcagtgatgacaacctggat
ggctataacaacggtagcattgctgtcactgaggtgaccatggaagactccctggtcagc
cagtacagccgacccagcgaagccaccccggacccgggcacactgcaggacagctccccc
ctcaatcccaacaccaccaccaatggcctgcccaactcggccgccattttagattag
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