Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139416866
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Entry
139416866 CDS
T10872
Name
(RefSeq) sodium channel protein type 8 subunit alpha-like
KO
K04840
voltage-gated sodium channel type VIII alpha
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
139416866
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ocla04040
]
139416866
Ion channels [BR:
ocla04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
139416866
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
GPHH
Neur_chan_memb
Dynamin-like_hel_bact
HB_ELP1
New_glue
HpsJ
Motif
Other DBs
NCBI-GeneID:
139416866
NCBI-ProteinID:
XP_071022113
LinkDB
All DBs
Position
9:complement(69864900..69946539)
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AA seq
1965 aa
AA seq
DB search
MAAPLMAPPGPDSFKYFTAETLANIELRINEEKNKPPPKQDSSHRDDDDDNKPKPNGDLE
AGRNLPFIYGDIPPGMVATPLEDLDPFYQAQKTFIVLNRGKTIFRFSANPALYIISPLNL
FRRIAIKILIHSLFSMIIMCTILTNCIFMTFSEPPEWSKQVEYTFTGIYTFECLVKVVAR
GFCIDGFTFLRDPWNWLDFMVISMAYITEFVDLGNVSALRTFRVLRALKTISVIPGLKTI
VGALIQSVKKLSDVMILTVFCLGVFALIGLQLFMGNLRQKCVIWPINSTENFLANGSIGF
DWNEYINNDKNFYFLPRQLDALLCGNSSDSGRCPEGFTCMKAGRNPNYGYTSFDSFGWAF
LALFRLMTQDFWENLYMLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQA
TMEEAEQKEAEFKAMLEQIKNQQEAAQSNAMATSAGTMSEDVGDDDGGGTLSCSSSEMSK
LSSKSAKERRNRKKKWRQKEQSQREEKGDCEKFVKSESDDGSKRSRFRFPDNRLGRKSSI
MNQSLLSIPGSPFLSRHNSKSSIFSFKGVGSENEFADDEHSMVEECEERRGPRFSPYRRC
SYTSYHHGGGKRNSTVDCNGVVSLISPGTGGRLLPEVKIDKASGDDSPTTEVEVKKKLSG
SLMVSMDQLNTSFGRKERTNSVMSVITNTLAEELEESQRSCPPWWYKFSNMVLIWECCPI
WLKIKEIVNLIVMDPFVDLAITVCIVLNTLFMAMEHYPMTPHFEEVLFVGNLVFTGIFAV
EMFAKLVAMDPYYYFQEGWNCFDGFIVTLSLVELALADVEGLSVLRSFRLLRVFKLAKSW
PTLNMLIKIIGNSVGALGNLTLVLALIVFIFAVVGMQLFGKNYKDCVCKIALDCELPRWH
MHDFFHSFLMVFRVLCGEWIETMWDCMEVAGQGMCLIVFMMVMVIGNLVVLNLFLALLLS
SFSADNLAATDDDGEMNNLQISVIRIKKGIAWFKIKLAELVLSLTKKPPVEDEQKTVDDM
YDKKLNCIANQSGVDINRDLDYTKNGNGTTSGMGSSFGRYLIDEDHMSFIHNPNLTVCVP
IAVGESDFENLNTEEFSSESENENSKDLDDTSSSEGSTIDIKPDVEVEAVVVEAEEVYLD
PENCWTPECIIKYPCCDVPITHGWGKYWWFLRKTCYLIVEHNWFETVIIFMILLSSGALA
FEDVYIQQRKTIRTILEYADSVFTYIFILEMLLKWVAYGFHKYFTNAWCWLDFFIVDVSI
ISLVANALGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLI
FWLIFSIMGVNLFAGKYYYCFNQTAEEYFDAREVNNKTQCLALIEQNFTEVRWKNVKINF
DNVGAGYLALLQVATFKGWMDIMYAAIDSRRVEDQPIYEDNIYMYIYFVIFIIFGSFFTL
NLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPQNKIQGLVF
DFVTQQVFDISIMMLICLNMVTMMVETDDQSDETENILYWVNFIFIVAFTTEFVLKLFAL
RHYYFTNGWNVFDTVVVVLSIAGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGAKG
IRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFGYVKHGAGIDDMYNFETFGNSMI
CLFMITTSAGWDGLLLPILNYPPDCDSTMENPGAPSTGNCGNPSVGIFFFVMYIIISFLV
VVNMYIAIILENFSVATEESADPLSEDDFETFYEIWEKFDPAASQFITFAKLGDFADTLE
HPLRIPKPNTIELIAMDMPMVSGDRIHCLDILFAFTKRVLGDSGELDMLRTQMEERFVQA
NPSKVSYEPITTTLRRRQEDISARCIQKAYRAHLLKRGFICKCRPKTKLENGGTNNQEKK
ESTASTASLPSYDSVTKPDKEKQEENEGEMREKDRNQKDERESKF
NT seq
5898 nt
NT seq
+upstream
nt +downstream
nt
atggctgctccccttatggcaccaccaggacctgacagctttaaatattttaccgcggaa
acattggctaacatcgagctccggatcaacgaggagaagaacaaaccgccgcccaaacag
gacagcagtcaccgtgacgacgacgacgacaacaaacccaagcctaatggcgacctggag
gctgggcggaatctgcccttcatctatggcgacatccctcctggaatggtggcgacacca
ctggaggacctggaccctttctaccaggctcagaaaacattcatagtgctaaacagaggg
aagacaatcttccgctttagtgccaaccctgccttgtacatcataagtcctttaaatctt
ttcaggcgaatagctattaaaattttgatacattctcttttcagcatgatcattatgtgt
actattttgaccaactgtatattcatgacctttagtgaacctcctgagtggtccaagcaa
gtagagtacacattcacagggatttatacatttgaatgtcttgtaaaagtcgttgctcga
ggattctgtatagatgggtttacattcctaagggatccctggaactggctggatttcatg
gtcatttctatggcatatataacagagtttgtggacctgggcaatgtctctgcgttgaga
acattcagagttctccgagcattgaaaactatctctgtcataccaggcctgaagaccatt
gtcggtgctctaatacaatcggtgaagaaattgtcagatgttatgatcctcacggtattc
tgtctcggtgtcttcgctctgattggactacagctcttcatgggcaacctacgacaaaaa
tgcgtgatttggccaatcaactccaccgagaacttcttggccaacggcagcataggcttc
gactggaatgaatacatcaataacgacaaaaatttctacttcctgcctagacaattggat
gcccttttatgtggcaacagttcagattctggccgctgccctgaaggcttcacatgcatg
aaagctggcaggaatccaaattacggttacaccagctttgacagctttggatgggctttc
ctggctctcttcagactcatgacacaggacttctgggagaacctctacatgctgaccctg
cgggcagcagggaagacctacatgatcttctttgtgttggtgatcttcgtggggtccttc
tacctggtcaatctgatcctggctgtggtggccatggcctatgaggagcagaaccaggcc
accatggaggaggctgagcagaaagaggcggagttcaaagccatgctggagcagatcaag
aaccagcaggaggctgcacagtccaacgccatggcgacgtcggcaggcaccatgtcggag
gacgtaggggatgatgacggcggggggaccctgtcctgtagctcgtcagagatgtccaag
ctcagctccaagagcgccaaggagcggcgcaaccgcaagaagaagtggcgccagaaagag
cagtcgcagcgggaggagaagggggactgcgagaagtttgtcaagtccgagtcggatgac
ggcagtaagaggagccgcttccgtttccctgacaaccggctaggccgcaagtcttccatc
atgaaccagtcccttctcagtatccccggctcaccgtttctgtcgaggcacaacagcaag
agcagcatcttcagcttcaagggcgtgggctcggagaacgagttcgccgacgacgagcac
agcatggtggaggagtgcgaggagaggcggggcccccggttcagcccgtaccggcggtgc
agctacacgagctaccaccacggtggtgggaagaggaattccacggtggactgcaacggc
gtggtgtctctgatcagtccggggaccggcggacgccttttgcctgaggtgaaaatagat
aaggcatctggtgacgacagtcccactactgaggttgaggtgaagaagaagctgtctggt
tccctgatggtgtctatggaccagctcaatacctccttcggaaggaaagagcggaccaac
agtgtcatgagcgtcatcaccaacacactagcggaggaactggaggagtctcagcgtagt
tgtccaccgtggtggtataagttctccaacatggtcctcatctgggagtgttgtcccatc
tggttgaagatcaaggagatcgtcaacctgatcgtcatggaccccttcgtggacctggcc
atcactgtctgcatcgtcctcaacaccctgttcatggccatggagcactatcccatgacc
ccgcactttgaggaggtgctgttcgtgggaaacttggtgttcacagggatctttgctgtg
gagatgtttgccaagttggttgccatggatccctactactacttccaggaggggtggaac
tgcttcgatggcttcattgtgactctgtccttagtggagctggcactggctgacgtggag
gggctgtccgtgctcagatcattccgattgctgagagtgtttaaactggccaagtcatgg
cccacactcaacatgctgattaagattatcggtaactctgtgggcgccctgggaaacctg
acccttgtcttagctctcatcgtcttcatctttgccgtggtcggcatgcagctgttcggc
aagaactacaaggactgtgtgtgtaagatcgccctggactgtgagctgccccgctggcac
atgcacgacttcttccactcgttcctgatggtgttccgggtgctgtgcggggagtggatc
gagaccatgtgggactgtatggaggtggctggccagggcatgtgtctcatcgtcttcatg
atggtcatggtcatcgggaacttggtggtgttgaaccttttccttgccttgctgctgtcc
tcgttcagcgcagacaatttagccgcaacagatgacgacggagaaatgaacaaccttcag
atctccgtcatccgtatcaagaagggcatcgcctggttcaagatcaagctggcagagttg
gtgctcagcttgaccaagaagcctccggtggaggatgaacagaaaaccgtagacgacatg
tacgacaagaaactgaactgtatcgccaaccagagtggtgtggatatcaaccgtgacctg
gactacaccaagaatggtaacggcaccactagtggtatgggaagcagcttcgggaggtac
ttgatcgacgaggaccacatgtcgttcatccacaaccctaacctgaccgtgtgcgttcct
atcgcggtcggagagtccgacttcgaaaacctcaacaccgaggaattcagcagcgagtcg
gagaacgagaacagcaaagatctggatgacaccagctcatcagagggcagcaccatagac
atcaagcctgatgtggaggtggaggcggtggtggtggaggctgaagaagtgtacttagac
ccagaaaactgttggacacctgagtgtattatcaagtatccttgctgcgatgtgcccatc
actcacgggtggggaaaatattggtggttcctgagaaagacatgctatcttattgtggag
cataactggttcgaaaccgtcattatctttatgatcctactcagtagtggggccctggct
tttgaggatgtgtacatccagcagaggaagactatcaggaccatcttggaatatgccgac
agtgtgttcacctacatcttcatcctggagatgctgctcaagtgggtcgcttacggattc
cacaagtacttcaccaacgcctggtgctggcttgacttcttcatcgtcgatgtgtctata
atcagtctggtagctaatgcactgggctactcggatctaggtcctattaaatcactaagg
acactaagggccttgagacccctcagagccttgtcacgttttgaagggatgagggttgta
gtcaacgccctggtgggagccatcccctccattatgaatgtgttgctggtttgcctcatc
ttttggctgattttcagtatcatgggagtcaacttgtttgcgggcaagtattactactgt
ttcaaccagacagcagaggagtactttgatgccagagaggtcaacaacaagacacagtgc
ctggccctcattgaacagaacttcactgaggtcaggtggaagaatgtcaagatcaacttt
gacaatgttggcgccggatacctggctctgcttcaagtggcaacattcaaaggctggatg
gacatcatgtacgcagccatagactccagaagggtggaggaccagcccatctatgaagac
aacatctacatgtatatctacttcgtcatcttcatcatctttggatccttcttcaccctc
aacctcttcatcggtgtcatcattgacaacttcaaccaacagaagaaaaagtttggaggt
caggacatcttcatgacagaggaacagaagaagtactacaacgccatgaagaaactgggt
tcaaagaagccccagaaacccattcccagaccacagaacaagatccaagggttggtgttt
gactttgtgacccagcaagtgttcgacatctccattatgatgttgatctgcctcaacatg
gtcaccatgatggtggagacagacgaccagtcggatgagacggagaacatcctctattgg
gtcaacttcatcttcatcgtggcattcaccaccgagttcgtcctgaaacttttcgccctg
cgccactactacttcaccaatggctggaacgtgttcgacacggtcgtcgtcgtcctgtcc
atcgcgggcatgttcctggctgacatcattgagaagtacttcgtatcgccgaccctcttc
agggtcatccgattggctcgaatcggccgcatcctgcgtctgatcaaaggggccaagggg
atacggactttactcttcgccttgatgatgtcacttcctgccctgttcaacatcggcctc
ctgctcttcctggtgatgttcatcttcagcatcttcggaatgtccaactttggctacgtc
aaacacggggccgggatagacgacatgtataactttgagaccttcgggaacagcatgatc
tgcttattcatgatcaccacgtctgcaggctgggatggtctcttgctccccatcctcaac
taccctcctgactgcgactcaaccatggagaacccaggtgcaccgtctacaggcaactgc
ggcaacccctcagtcggcatatttttctttgtgatgtatatcattatttccttccttgtc
gtagtcaatatgtacatcgccatcatcttagagaatttcagtgtagcgacagaagagagc
gccgacccgctcagtgaagacgactttgagaccttctatgaaatctgggagaaatttgac
cccgccgcttcccagttcatcaccttcgcaaagctgggtgacttcgcagacaccctggag
caccctctccgcattcccaaacccaacaccatcgagctgatcgccatggacatgcccatg
gttagcggcgaccgcatccactgcctggacatcctgtttgccttcaccaagcgtgtgctg
ggcgacagtggcgagctggacatgctacgcacgcagatggaggagcgcttcgtgcaggcc
aacccctccaaggtgtcatacgagcccatcaccacgacactgcgccggcgccaggaggac
atatccgcacgctgcatccaaaaagcctaccgcgctcacctcctcaaacggggcttcatc
tgcaagtgcaggcccaagaccaagctggagaacggagggaccaacaaccaggagaagaaa
gagagcacagcctccaccgcctctcttccctcgtacgacagcgtgaccaaacctgacaag
gagaaacaggaagagaacgagggagagatgagagagaaggacagaaatcaaaaagatgag
cgggaatctaaattttag
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