Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139416875
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Entry
139416875 CDS
T10872
Name
(RefSeq) integrin beta-7-like isoform X1
KO
K06590
integrin beta 7
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04510
Focal adhesion
ocla04512
ECM-receptor interaction
ocla04514
Cell adhesion molecules
ocla04672
Intestinal immune network for IgA production
ocla04810
Regulation of actin cytoskeleton
ocla04820
Cytoskeleton in muscle cells
Brite
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
139416875
Cell adhesion molecules [BR:
ocla04515
]
Integrins
Integrin beta subunits
139416875
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139416875
NCBI-ProteinID:
XP_071022129
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Position
9:complement(70175598..70189661)
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AA seq
773 aa
AA seq
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MRKVWLAVVVLLIHFSELRGSMGLDGRCLSKPTCTECLRSLGCAWCKQKDFLAQGEPDER
RCDREEALRKRHCSDGQVLNPQPAIRSRAEEPMGNGVQLEPQNLHLKLRVGMPQSFEVRF
RRAEVYPIDLYYLMDLSFSMKDDLKNIRNLGPEVATAMKNITSALRIGFGSFVDKVAVPY
VSTVEAKLANPCIEGYKNPCQPAFSFKHVLKLTEDVEEFERKVSKQSISSNLDNPESGFD
AIMQVAVCQDDIGWGNATRILVYTSDDIFHLAGDGKLAGIYQPNDGKCHLNSNGLYNKDT
VYDYPSVGHLSQVLSANNIRLIFAVTDQHIQNYEALSEMIPQSVVGLLEDDSSNVVQLIS
EACNNLLSSILLEHRDVPPGLGVSYNSHCGDDRLAQGQDRGECSDVRTNQQVNFTVTVTS
SSCLSKTESFIIKVQGINEELRVTVETLCDCDCQDSEEQSSQCHGNGTFHCGICSCDSGH
TGQRCECETQPDKDTSLASETLCSSAQTNSTGTPLCSGHGSCVCGQCICWGQHRGQHCQC
DDISCNRHNNMICGGNGRCDCGNCECFHNYTGPACECSTLTDQCQTSNDGICSHRGQCEC
NECHCHPGFFGSHCTKPLAPCDTYRACVACMLHESAINMCHHPCGSAKPIRINGTQSFTC
QDDPVRFNVELLINTGDIFVYYTDTPRGIDPWIINMGKAVVGIVLLGVIMIIIYRLMLEV
SYQRERRSFLKDKENICWEDTQNPLFQEAKTTFTNPMQVLEPDADCATSTFGK
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaggtgtggctggctgtggtggttcttctgatacacttcagtgagctgagagga
tctatgggcctggatggaagatgcctgtctaagcccacctgcactgagtgtctgagaagc
cttggctgtgcctggtgtaaacagaaggatttcctggcgcaaggggagccagacgagcgt
cgctgtgacagggaggaggcactgagaaagagacactgctctgacggacaggtcctgaac
ccccagcctgcaatacggagcagggcagaggagccaatggggaacggggtccagctagag
ccacagaacctccaccttaagctaagagttggcatgccccagtcatttgaggtgaggttc
aggcgtgcagaggtttatcccatagacctgtactacctgatggacctgtctttctccatg
aaagatgacctgaagaacattaggaacctgggaccggaggtggccactgccatgaagaac
atcaccagtgctctcaggataggctttggttcctttgtggataaggtggcggtaccctac
gtcagtacagtggaggccaaactggccaacccatgcattgaggggtacaagaacccctgc
cagcctgccttcagcttcaaacatgtactgaagctcactgaggatgttgaagagtttgag
agaaaggtgagcaagcagagcatctccagtaacctagacaacccagagtcaggctttgac
gccatcatgcaggtggctgtctgtcaggatgacattggctggggtaatgcaactcgtatc
ctggtctacacctcagacgatatcttccacctggcaggtgatgggaagcttgctgggatc
taccaacctaacgacgggaaatgccacctgaatagcaatgggctctataataaggacacc
gtttatgactatccctcagttggacacctatctcaggtcctatcagccaataacatcagg
ctgatctttgcagtgacagaccagcatattcaaaactatgaggcactcagtgagatgatc
ccccagtcggtggtgggcctcctggaggatgactccagcaacgttgttcagctcatctct
gaggcctgcaacaacctattgtcctccatcctcctggagcaccgtgacgtcccaccaggc
ctgggggtctcctacaactcccactgtggtgatgacaggctagctcaggggcaggacaga
ggggagtgcagtgatgtcagaaccaatcaacaggtcaatttcacagttactgtgaccagc
tcgagctgtctgtccaagacagagtctttcatcatcaaagtgcagggtatcaatgaagag
ctgagggttaccgtggagacgctgtgtgactgtgactgtcaggactccgaggaacagtca
tcccagtgtcatggcaatggaacattccactgtggtatctgtagctgtgattcaggacac
acaggccagcgttgtgagtgtgaaacacagccggacaaagacaccagtctggcctcagag
accctgtgttcatctgcacagacaaacagcacaggcacaccactgtgcagcggccatggg
agctgtgtgtgtggccaatgtatctgctggggccaacacaggggccaacactgccagtgt
gacgacattagctgtaaccgtcacaacaacatgatctgtggcggtaatgggaggtgtgac
tgtggtaactgtgagtgtttccacaactacacaggccctgcatgtgaatgctctaccctc
acagatcagtgccagaccagtaatgatggaatctgctctcaccgaggacagtgtgaatgt
aatgaatgccattgtcaccctggtttctttggcagccactgcaccaagcccctggcacca
tgtgacacataccgggcctgtgttgcttgcatgttacatgagtcagccataaacatgtgt
caccatccctgtggctctgccaagcctatccgcatcaatgggactcaatcattcacctgt
caggatgatcctgtacgttttaatgtggaactcctcataaatactggtgacatctttgtc
tactacacagatactccaagagggattgacccatggattataaacatggggaaggcagtg
gtaggaatcgttttactgggtgtcatcatgataataatttaccggctgatgttagaagtg
tcctaccagcgggagcgtagaagtttcctgaaggataaggaaaatatctgctgggaagac
actcaaaatccactgttccaagaggccaagacaacattcaccaaccccatgcaagtgttg
gagccagatgcagattgtgctacatcaacctttggaaaataa
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