Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139416893
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Entry
139416893 CDS
T10872
Name
(RefSeq) keratin, type I cytoskeletal 18
KO
K07604
type I keratin, acidic
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
139416893
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocla04812
]
139416893
04147 Exosome [BR:
ocla04147
]
139416893
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
139416893
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
139416893
Exosomal proteins of other body fluids (saliva and urine)
139416893
Exosomal proteins of colorectal cancer cells
139416893
Exosomal proteins of melanoma cells
139416893
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Rod_CreS
DUF4407
UPF0449
TBCA_PH
DUF489
DUF1759
Motif
Other DBs
NCBI-GeneID:
139416893
NCBI-ProteinID:
XP_071022154
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All DBs
Position
9:70918823..70925858
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AA seq
438 aa
AA seq
DB search
MSVKRSSVRGPGSGYGYSITHNSTAPTYRAASTYGGAGGQGTRISSVSYSGVRSGMGGMG
VGMGGSGGSMSSSIQVSASGDTAHIMGNEKFAMQNLNDRLASYLEMVRNLEQANGKLELK
IREAMEKRGPDVNDYSRYNAILDDLRKKVFDATTDNARMCLQIDNARLAADDFRVKFESE
LSIRQSVEADIVGLRKVIDDTNMGRMNLESEIEALKEELIFLKKNHDNEVMEMRNMISQS
GVQVDVDAPKGQDLAAIMAEVRAKYEKEALKNQEELKAWHETRITEVQSVVSQNTEALQG
AHTEINDLRRQLQTLEIELDSQKSLKGSLEGTLRDTEMRYNMEMESLNKILVGLESELTN
LRSNIQQQTQEYEHLLNIKMKLEAEIATYRRLLDGGDFKLQDALEDQRTVKTKVMTVTQT
LVDGKVVSSSTETKERNL
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtcaaacgaagcagcgtcaggggacctggcagtgggtacggctactccatcact
cacaactctactgctcccacctaccgggccgccagcacctatggtggtgctgggggtcag
gggacccgaatctcttctgtgtcctattcgggtgtgcgaagcgggatgggagggatgggg
gttgggatgggaggctccgggggctccatgtccagcagcatccaggtgagcgccagcggg
gacactgctcacatcatgggcaatgagaagtttgccatgcagaacctcaacgaccgtctg
gcatcctacctagagatggtgaggaacctggagcaggccaacggcaaactggagctgaag
atcagggaggccatggagaagagaggcccagacgtcaacgactacagccgctacaacgcc
atcttggatgacctgaggaagaaggtgtttgatgccacaacagacaacgcccgtatgtgt
cttcagatcgacaatgcccgcttagctgctgatgacttcagggtgaagtttgagtctgag
ctgtccatacgccagtctgtggaggctgacatcgttggcctgaggaaggtcatagatgac
accaacatgggccgcatgaacctggagagtgagatcgaagctctgaaggaggagctcatc
ttcctgaagaagaaccacgacaacgaagtgatggagatgcgtaacatgatctcccagtct
ggagtgcaggtggacgtggatgctcctaagggccaggacctggccgccatcatggctgag
gtccgggccaagtacgagaaagaggccctgaagaaccaagaggagctcaaagcatggcat
gaaacacggatcacagaggtgcagtctgtggtgtcacagaacacagaggccctccaaggc
gcacacacagagatcaacgacctccgtagacagctacagacactggagatcgagctggac
tcacaaaagagcttgaaaggatctctggaggggacgttgcgagacacggagatgcgctac
aacatggagatggaatccttgaacaagatcctcgtgggtctggagtctgagctgactaac
ctccgctccaacatccagcagcagacgcaggagtacgagcacctgctcaacatcaagatg
aagctggaggcggagatcgccacatacaggagactgctggacggaggagacttcaagctc
caggatgctctggaggaccagcggacagtgaagaccaaggtgatgaccgtcacacagacc
ctggtggacgggaaggttgtctcctccagcacagagacaaaggagaggaacctgtga
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