Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139416905
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Entry
139416905 CDS
T10872
Name
(RefSeq) tumor necrosis factor receptor superfamily member 5-like
KO
K05152
tumor necrosis factor receptor superfamily member 14
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03266
Virion - Herpesvirus
ocla04060
Cytokine-cytokine receptor interaction
ocla05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
139416905
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
139416905
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
139416905
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
ocla04050
]
139416905
04090 CD molecules [BR:
ocla04090
]
139416905
Cytokine receptors [BR:
ocla04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
139416905
CD molecules [BR:
ocla04090
]
Proteins
139416905
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNFR_c6
TM_ErbB1
TNFR_ELAPOR1_6th
Podoplanin
Glycophorin_A
Motif
Other DBs
NCBI-GeneID:
139416905
NCBI-ProteinID:
XP_071022178
LinkDB
All DBs
Position
9:71330332..71338986
Genome browser
AA seq
259 aa
AA seq
DB search
MAPFETLTWTIHFILLNIEPCSTYDHLIYKIGDRYCRMCRPGYHVHSHCTTSTFTSCVPC
IDSTFLDEPSDKTTCNNCTTCDPGLGLKVKQPCRPSSDTVCGTLEGFYCLDPTKEGCRAA
QRHSSCKPGQYISHTGTTSTDTVCAICPGKTYSDGSLTSCQPHTECKFLEIEPGTPWSDS
ECGVASLPTAGIIAGVLFFLIGTIAGVCIFMRRREIGRNIKNLGSQIPTQASPDQEIPML
PGGIGNDSSPQHGQGVNVV
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atggcaccatttgaaaccttgacatggactatacattttatacttctaaacattgaaccc
tgttccacatatgatcacctcatctataaaataggtgacagatattgcagaatgtgtagg
cctggatatcatgtacatagtcattgtactacatctacattcacctcctgtgtgccctgt
attgactccaccttccttgatgagcccagtgataaaacaacatgcaacaactgtaccaca
tgtgatccaggtttgggtttgaaggtaaagcagccatgtagaccttcatcagacactgtc
tgtgggacactggaggggttctactgtctagacccaactaaggagggttgtagagcagcc
cagagacacagcagctgtaaacctggtcaatacatcagtcacacaggaacaacatctaca
gatactgtgtgtgctatctgccctggtaaaacttattcagatggatcattaacatcttgt
caaccacatacagaatgtaaattcttggaaattgaaccaggaactccttggtcggattca
gaatgtggagtagcctcacttcccacagctggaatcatagctggtgttctatttttcctg
ataggcaccatagctggtgtttgtatatttatgagaagaagagaaatagggagaaatata
aaaaacttgggctctcaaatacctacacaggcatccccagatcaggaaataccaatgctg
cctgggggaattggaaacgattcaagcccccaacacggtcagggagtcaacgttgtgtaa
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