Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139416944
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Entry
139416944 CDS
T10872
Name
(RefSeq) transcription factor LBX1a
KO
K09353
homeobox protein LBX
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139416944
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
139416944
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
DUF7645
HTH_NDX
Remorin_C
Motif
Other DBs
NCBI-GeneID:
139416944
NCBI-ProteinID:
XP_071022237
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Position
1:complement(66602970..66604452)
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AA seq
266 aa
AA seq
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MTSKDPTVMEDRRRNALDQLPPPANSNKPLTPFSIEDILNKPSVKRSYSSCGTAHLLSSS
EKLSSSGHSLSSRALFTQTSPLCALEELASKTFKGLEVSVLQAAEGRDGTTLFGSRNNPK
KRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKLKRD
LEEMKADVESAKAVGTVSFEKMAKLAELEKCAANGALGPNRSESPSLSNHERNASNKLLL
SSPSSPYTDHTSSKGCSEDEEIDVDD
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgacctccaaagatcccacggttatggaggaccggagacgcaatgcgctggaccagctt
ccgccgccggccaactccaacaagcccctgacgccattcagtatagaggacatcctgaac
aagccctcggtaaagagaagttattctagctgcgggacggcgcacctgctctcctccagc
gagaagctgtcctcttcagggcatagcctgtccagccgggcccttttcacccaaacctcc
ccgctctgcgctctggaggagctcgccagcaaaaccttcaaagggctcgaagtcagtgtt
cttcaagcggcggagggccgagacggcacgacactattcggttcgcggaataaccccaaa
aagcgccggaagtctcgcaccgccttcaccaaccaccagatctacgagttggaaaagcgc
ttcctttaccagaagtacctgagtccagctgaccgcgaccagatagcacagcagctcggc
ctcaccaacgcgcaggtcatcacctggttccaaaaccggcgcgccaagctcaaacgcgac
ctggaggagatgaaggcggacgtggagtcggccaaagccgtgggaaccgtgtcgtttgag
aagatggccaaactagccgaactggagaaatgcgcagctaacggggcgctgggccctaac
agatctgagtcaccctcgttatcgaaccatgagcgcaacgcctcgaacaaactcttattg
tcctccccttcgtcgccatatacagaccatactagcagcaagggctgctccgaggatgag
gagattgacgtggatgactga
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