Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139416976
Help
Entry
139416976 CDS
T10872
Name
(RefSeq) ubiquitin-like modifier-activating enzyme 1
KO
K03178
ubiquitin-activating enzyme E1 [EC:
6.2.1.45
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
139416976
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocla04121
]
139416976
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ocla04147
]
139416976
Enzymes [BR:
ocla01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.45 E1 ubiquitin-activating enzyme
139416976
Ubiquitin system [BR:
ocla04121
]
Ubiquitin-activating enzymes (E1)
Ubiquitin activating enzyme
139416976
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
139416976
Exosomal proteins of other body fluids (saliva and urine)
139416976
Exosomal proteins of colorectal cancer cells
139416976
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_E1_SCCH
ThiF
E1_UFD
E1_FCCH
E1_4HB
DUF7243
Motif
Other DBs
NCBI-GeneID:
139416976
NCBI-ProteinID:
XP_071022303
LinkDB
All DBs
Position
9:complement(79384596..79435855)
Genome browser
AA seq
1059 aa
AA seq
DB search
MSSSPLSKKRRVSDSETKTGSHCSSSNSVRTELSHTPTNGMAKNGNDAEIDEGLYSRQLY
VLGHDAMKRMQSSNVLVSGLRGLGVEIAKNVILGGVKSVTLHDQGQAEWRDLSSQFYLRE
KDLGKNRAEVSRIRLAELNSYVPVVAYTGVLIDDYLTQFQVVVLTNSPLEEQQRVGDFCH
SNGIKLVIADTRGLFGQLFCDFGEEMLVIDTNGEQPLSAMISMITKDASGVVTCLDEARH
GFESGDFVTFTEVQGMTELNGCQPVEIKTLGPYTFSICDTTGFADYVRGGIVSQVKMPQK
VVFKPLTASMAEPEFVLTDFAKFERPGQLHLGFQALHSYQRKHSRLPKPWCQADGEELVS
LAKEVNSGQTGSAKVDELDDKLIKKLAFVSAGDLAPLNAFIGGLAAQEVLKACTGKFMPI
MQWLYFDALECLSEEEGGAMLTEEDCAPRNSRYDGQIAVFGSQLQEELAKQRYFLVGAGA
IGCELLKNFAMIGLASGEGEVIVTDMDTIEKSNLNRQFLFRPWDVTKMKSETAAAAVKQM
NPSIRITGHQNRVGPDTERVYDDDFFESLHGVANALDNVDARMYMDRRCVYYRKPLLESG
TLGTKGNVQVVIPFLTESYSSSQDPPEKSIPICTLKNFPNAIEHTLQWARDEFEGLFKQP
SENAMQYLTDAKFLERTLKLPGAQPLEVLEAVYKSLVTDCPHSWADCVIWARHHWQCQYS
NNICQLLHNFPPEQLTSSGAPFWSGPKRCPHPLEFSTSNHLHMDYVMSGANLFAQSYGMQ
GSTDRVGVAKILDSLSVPTFVPRSGVKIHVSDQELQSANANVDDNRLEELKTLLPGPEAS
SHFKLTAIDFEKDDDSNFHMDFIVAASNLRAENYHIPPADRHKSKLIAGKIIPAIATTTS
AVVGLVCLELIKIVQGHKKVESFKNGFMNLALPFFTFSEPISAPSHKYYEIDWSLWDRFE
VKGLQANGEEMTLRQFLDYFKNEHQLEITMLSQGVSMLYSFFMPAAKLKERLLLPMTEIV
TKVSKKKLGKHVKALVFELCCNDLTDEDVEVPYVRYTIR
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgtccagctcgccgctgtccaagaagcgtcgcgtgtcagactccgagacgaagacggga
tctcactgctcctcctctaactctgtcagaactgaactgtctcacacacccaccaacggc
atggctaagaatggcaatgatgctgagatcgacgaaggcctgtactccagacagctctac
gtgttgggccatgatgctatgaagcgcatgcaaagctccaacgtcctggtctcagggctg
agagggctgggcgtggagatcgctaagaacgtcatcctgggaggagtgaagagtgttacc
ctgcacgaccagggacaggccgagtggagagacctctcctcacagttctacctgcgtgag
aaggacctggggaagaacagggctgaggtgtctcggattcgcctggctgaactcaacagc
tatgtacctgtagtagcctacactggagtcctcatcgacgattacctgactcagttccag
gttgtggtcctgaccaactcccctctagaagagcagcagcgtgttggagacttctgtcac
agtaacggcatcaagctggtgatcgctgacacacggggactcttcggacagctcttctgc
gacttcggagaggagatgctggtgatcgataccaacggagagcagcctctctctgctatg
atctccatgatcaccaaggacgcttcaggcgtggtgacgtgtctagacgaggctcgccac
gggtttgaaagcggagacttcgtgaccttcaccgaggtccagggcatgacggagctcaac
ggctgccagccagtagaaatcaagaccctgggcccctacaccttcagtatctgtgacacc
acaggtttcgccgactacgtcaggggcggcatcgtctctcaggtcaagatgccccagaag
gtggtcttcaaacccctgactgcgtccatggcagagccagagtttgtgctgacagacttt
gctaagtttgagcgaccaggacagcttcacctgggcttccaggctctacacagctaccag
aggaaacacagcaggctgcccaagccctggtgccaggctgatggagaggagttggtgtcc
ctggctaaagaggttaactccggccagacggggtcagccaaagtggacgagctggatgac
aagctcattaagaaactggccttcgtctccgccggcgacctggcaccactcaacgctttc
attggtggactggccgcacaggaagttctgaaggcgtgtacagggaagttcatgcccata
atgcagtggctgtattttgatgctctggagtgtctgtctgaggaagagggaggagccatg
ctcactgaggaggactgtgcccctagaaacagccgttatgacggccagatcgctgtgttt
ggctcccagctgcaagaggagttggctaaacaacgttacttcctggttggggctggcgct
attggctgtgagctgctgaagaactttgccatgattggattggccagcggggagggtgag
gtcatcgtgacggacatggacaccatagagaaatccaacctcaacagacagttcctcttc
aggccgtgggacgtgacgaagatgaagagcgagacggcggcggcggcggtgaagcagatg
aacccgtccatccggatcacgggacaccagaaccgcgtcgggcccgacaccgagcgagtc
tacgatgacgacttcttcgagagcctccacggagtcgccaacgctctggacaacgttgac
gcacgtatgtatatggaccggaggtgtgtctactacaggaagcccctgttagagtccggg
actctgggtaccaagggaaacgtccaggtggtcatccccttcctgacagagtcatacagc
tcctcccaggaccctccggagaagtccatccccatctgcacactgaagaacttccccaac
gccatcgaacacaccctgcagtgggcccgtgatgagtttgagggtctgtttaaacagcct
tcggagaatgccatgcagtacctcactgatgctaagttcctggagaggaccctgaagctg
cctggagcccagccgctagaggtgttggaggccgtctataagagcttggtgacggactgc
cctcacagctgggccgactgtgtcatctgggctcgccaccactggcagtgtcagtacagc
aacaacatctgtcaactactgcacaacttccccccagaacagctgaccagctctggcgcc
cccttctggtccggtccaaagagatgtcctcaccctctagagttcagtaccagcaaccac
ctccatatggactatgtgatgtcaggagccaacttgtttgcccagtcgtacggcatgcag
ggctctaccgaccgtgtcggcgtggctaagatcctggacagcctatcggtgcccaccttc
gtccccaggtcaggggtcaagatccacgtctctgaccaggagctgcagagcgctaacgcc
aacgtcgatgacaacaggctggaggaactgaagactctgctgcctggacctgaagcttct
tctcactttaaactcactgccatcgactttgagaaggatgatgactctaatttccacatg
gacttcatcgtggcggcgtccaacctacgagcagagaactatcacattccccctgccgac
agacacaagagtaagctgatagctgggaagatcattcctgcgatagcgaccaccacgtcg
gcggtcgtaggtctggtctgtctggagctcatcaagatcgttcagggacacaagaaggtg
gagtcttttaagaacggcttcatgaatctggcgctgccgttcttcaccttctcagaaccc
atctctgctcccagccacaagtactatgagattgactggtctctgtgggatcgttttgag
gtgaagggtctgcaggccaatggagaggagatgaccctccgacagttccttgactacttc
aagaatgagcatcagttggagatcaccatgctgtctcagggagtctccatgctctactcc
ttcttcatgcctgcagctaaactcaaggagaggctgctgttaccgatgacagagattgtg
accaaggtttctaagaagaagctggggaagcatgttaaagccctggttttcgagctgtgc
tgcaacgacctgactgacgaagatgtggaggttccctacgtcagatacaccatccgctga
DBGET
integrated database retrieval system
