Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139416981
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Entry
139416981 CDS
T10872
Name
(RefSeq) filamin-A-like
KO
K04437
filamin-A
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04010
MAPK signaling pathway
ocla04510
Focal adhesion
ocla04518
Integrin signaling
ocla05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
139416981
09133 Signaling molecules and interaction
04518 Integrin signaling
139416981
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
139416981
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
139416981
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocla04812
]
139416981
04147 Exosome [BR:
ocla04147
]
139416981
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
139416981
Intermediate filaments
Intermediate filament-binding proteins
139416981
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
139416981
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filamin
Ig_GEX2_N
CH
Y_Y_Y
Big_3_5
Invasin_D3
CFSR
Cep192_D4
CH_2
Motif
Other DBs
NCBI-GeneID:
139416981
NCBI-ProteinID:
XP_071022313
LinkDB
All DBs
Position
9:80594633..80760355
Genome browser
AA seq
2530 aa
AA seq
DB search
MSGSHPRQHQSVQPALNAPDMPATEKDLAEGATWKKIQQNTFTRWCNEHLKCVNKQITNL
QMDLSDGLRLIGLLEVLSQKKMFRKYNQKPTFRQMQLENVSVALEFLDKENIKLVSIDSK
AIVDGNLKLILGMVWTLILHYSISMPMWDEEEEGGDGQHKTPKQRLLGWIQNKLPEISIH
NFSRDWQSGRALGALVNSCAPGLCADWNQWDQTKPVDNAREAMKQADNWLGIPQVITPEE
IVDPNVDEHSVMTYLSQFPKSKLKPGTPLCPGLNPKNACAYGPGIEPVGNVVMKKAVFTV
ETISAGMGEVLVYVEDPAGHKEEAKVTANNDTNQTYSVFYIPKVTGMHKVTVLFAGLHIN
TSPYEVDVGMAQGDSSKATAQGPGLEPAGNIANKTTYFDVYTAGAGVGEVEVVIMDPAGK
KDVVVCQIEDKGNSLYCCTYKPTMEGAHTIYVTFAGGQISKSPFAVNIGEACNPSLVRAK
GRGLQPKGLRVKETADFRVFTKGAGTGELKVTIKGSKGLEEPCKRKDVGDGVFGFEYYPT
TPGTYSITITWGGQHILSSPLEVKIGSEAGPQNVRAWGPGLETGIMGKSADFVVEAVGDN
VGTLGFSVEGPSQAKVECDDKGDGSSDVRYWPMEAGEYAVHVLCNNEDIQHSPFMAEITA
APNKDFYPDKVNVYGPGLQSSGLAVGKRTEFTVDAKLGGKAPLKILAQDGEGTPVDVQVK
DNGNGTYTCSYTPKKPLKHTLMASWGGVNIPDSPFRMPIGAGCHPNKVKVSGPGVAKTGL
KAFEPTSFTVDCAEAGQGDISICIKCSSGVVGPAEADIDFDIIRNDNDTFTVKYTPPGAG
SYTIMVLFADQTIPMTPISIKVDPSHDASKVKAEGPGLNHSGVELTKPTHFTVNTKAAGK
AKLDAVFSGPAKGETVKDFEIINNPDNTHTVKYTPVQQGVLGVALTYGGDSIPKSPFSIP
VAPSHDLSKIQVAGLGDKMTVGKDQEVTVNSEGAGVQGKVWANVTGPSGKPVTSKVEAGL
KPETSQVKFIPWEAGPYQVELTFDGAPIPGSPFNPTAYPPTDATKVKCSGPGLEHAKVGE
TGEFVVDCTNAGPAELTIEIISDGGTEAEVHIQDNGDGTYTITYIPRYPGSYTLTIRYGG
QDVPNFPACLTVEPAFNTSGVRVFGPGVEGKGVFREATTDFTVDARPLTQMGGKHIKTVI
QNPSGAVTEAVITDHCDGTYSVEYTPYQEGPHIVDVAYDETPVPNSPFHVGVTEGCDPGR
VRVHGPGLDRGITNKANTFTVETRGAGTGGLGLGVDGPSEAKMSCNDNKDGSCSVEYIPY
EAGTYNLNITYGGQPIAGSPFQVPVSDTVDSSKVKCMGEGLGTNVRANIPQAFSVDTSKA
GVAPLQVRVQGPKGVVETAELVDNGDQTYTVNYIPTREGPYSINVLYADQEIPRSPYTVQ
VLPTHDASKVHASGPGLNTTGVPASLPVEFTIDVKDAGMGLLAVQITDPEGKPKKASVCD
NQDGTYLVSYVPDMVGRYTVLIKYGGDEIPYSPYHVRALPNGDASKCIVTGAGVGTAIQS
GEQTVITVNAKAAGKGKVTCSVCASEGVELDVDVMENEDGTFDIFYTAPQPGDYCICVRF
GGELIPNSPFLVTALEGAPSDQLLQQEQLPQYYSQQPSASDQPMRTNGLDVVGLRPFDLI
IPFTIQNGEITGDVRMPSGKTAKPDITDNKDGTVTVKYAPTEVGLHEMDIKYDGIHIPGS
PLQFYVDYVNSGNVSAYGPGLIHGTVNKPAMFTVNTKDAGEGGLSLAMDGPSKADISCVD
NQDGTCSVSYLPVLPGQYSILVKYNDKHIPGSPFSACITGDDSMRVSHLKVGSAADIPLD
IGELDLSQLTASLTTPSGQEEPCHLKMLRNGHVGISFVPTEIGEHLVNIKKNRHHIPSSP
ITVMISQSVIGDASLVRVTGQGLSEAKTFESAEFIIDTRKAGYGCLSLSIEGPSKVDINT
EDQEDGTCKVTYCPTEPGSYIINIKFTDQHVPGSAFTVKVTGEGRMKESITRKKRAASVA
NIGSQCDLSLKIPEISITDMMAQVTSPSGQVQEADIMEGENNTYCIRFVPTETGVHTVCV
KYAGVHVPGSPFQFTVGPLGEGGAHKVRAGGPGLERAEAGVPAEFSIWTREAGAGGLSIM
VEGPSKAEITFEDRKDGSSGVSYMVQESGNYEVSVRFNEEHIPDSPFVVPVASPSDDARR
LTVAGLQESGLKVNHPASFAVSLNGAKGQIDAKVHSPSGALEGCCVTELDQDKYAVMFIP
RENGLYLIDVKFNGSHIPDSPFKIRVGETGKAGDPGMVTAYGAGLEGGTTGIACEFVVNT
STAGPGALAVTIDGPSKGKVDCVECPEGYKVTYTPMAPGNYFISIRYGGPYHIVGSPFKA
KITGSKRVSSHSNHETSSVMVDDMTRHVSYSHQGAPSQSDASCVTAKGLGLSKGFIDQKN
NFSVDCSKAGRNMLLVGVDGPRVPCEEVLVKHLGNRVYHVSYQLKEKGEYILVVKWGEQH
IPGSPYHIIV
NT seq
7593 nt
NT seq
+upstream
nt +downstream
nt
atgagtggctcccacccccgccagcaccagtcggtccaaccggcgctcaacgccccggac
atgcctgctacagagaaggacctcgcagagggcgcgacatggaagaagatccaacagaac
accttcacccgctggtgtaacgagcatctgaaatgcgtcaacaagcagatcaccaatctc
cagatggacctgagtgacgggctgcggctgatcggactcctggaggtgttgagccagaag
aaaatgttcaggaaatacaaccagaaacccaccttccgacagatgcagcttgagaacgtt
tcggtagcgctcgagttcctagacaaggagaacatcaagctggtgtccatagactccaag
gccatagtggatggtaacctgaagctgatccttggcatggtgtggacattgatcctccac
tactccatctccatgcccatgtgggacgaggaggaggaggggggtgacggccagcacaag
accccgaaacagaggcttctgggatggatccagaacaagctcccagagatctccatccac
aacttcagcagagactggcagagtggcagagcactgggggcactggtcaacagctgtgct
ccgggcctgtgtgcagactggaaccagtgggaccaaactaaaccagtggacaacgcccgg
gaggccatgaaacaggctgataactggctgggcatccctcaggtgataaccccagaggaa
atcgttgaccccaatgtagatgaacattccgtgatgacatacctgtcccagttccccaag
tccaaactgaagcctggcacacccctgtgcccaggactcaaccccaagaatgcctgcgca
tacggaccaggtatagagccagtaggtaacgttgtgatgaagaaggcggtgtttacagtg
gagaccatcagtgctgggatgggagaggtgctggtgtatgtagaggaccctgccggacac
aaagaggaggccaaagtgacagccaacaatgatacgaaccaaacctactctgtcttctac
atacccaaggtcactgggatgcacaaggtgacggtgctgtttgcggggctacacatcaat
acgtctccttatgaggtggatgtggggatggctcagggagacagcagtaaagctacagcc
cagggacctggactagaacctgccgggaacatcgccaataagaccacatactttgacgtc
tacaccgcaggtgctggtgtgggagaggtggaggtggtgatcatggacccagcgggtaag
aaggacgtggtggtgtgtcagatagaggataagggcaacagtttgtactgctgcacctac
aaacccaccatggagggggcccacaccatctacgttaccttcgctggaggacaaatcagc
aagagccccttcgctgtcaacataggagaggcttgtaaccccagcctggttcgggctaag
gggcgtggtctccagcctaaaggcctcagggtgaaagagacagctgacttcagagtcttc
actaaaggagctgggactggagaactcaaagtcaccatcaagggctccaagggcctggag
gagccatgtaagaggaaggatgttggagatggagtgtttgggtttgagtactaccccacc
acccccggtacatacagtataacgataacctggggaggacaacacatcctcagcagcccg
ttggaggtgaagattggttcggaggcagggccacagaatgtgcgtgcctgggggcctggc
ctggagaccggcattatgggtaaatctgccgacttcgtggtcgaggccgtcggagacaat
gtgggaacactgggtttctcggtggagggtccgtcccaggcgaaggtcgagtgtgatgat
aagggcgacgggtcatctgacgtgcggtactggccaatggaagcaggagagtatgcggtg
catgtgctctgtaacaacgaggacatccagcactctcccttcatggctgaaatcactgct
gctccgaacaaggacttctaccctgataaggtgaacgtgtatggtccaggcctacagagt
agtggtctagctgtggggaaacggactgagttcaccgtcgacgccaaactaggaggcaaa
gcccctctcaagatcctggcacaggatggtgagggaaccccagtagatgttcaggtgaag
gataacggtaatggaacgtacacctgcagttacacccccaagaaacccctcaaacacacc
ctcatggcgtcctggggcggggtcaacataccggacagtcccttcaggatgccgatcggg
gcaggctgccaccctaacaaggtgaaggtgtcaggtcctggtgtggctaaaacagggctg
aaggcttttgaacctacatccttcactgtggactgtgctgaggcaggtcaaggtgacatc
agtatctgtataaagtgctcttcaggcgtggtgggaccggcggaggcagacatcgacttc
gacatcatcaggaacgacaacgacacgtttaccgttaaatacaccccgccaggcgctggt
agttacactatcatggtgctgtttgctgaccagaccatccccatgactcccatcagtatc
aaagttgacccgtcacatgacgccagcaaggtcaaggccgagggaccaggactcaaccat
agtggtgtggagttgaccaagccgacccacttcacagtaaacaccaaggctgcaggtaaa
gccaagctggacgctgtgttctccggcccggctaaaggagagacggtcaaggactttgag
atcatcaacaaccccgataacacccatacggtcaagtacacccctgtccagcagggtgtt
ctgggagtggccctcacctacggaggagattctattcccaagagtcccttctccatcccc
gtggcaccaagccatgacctcagcaagatacaagtggctggactgggtgataagatgacg
gtgggtaaggaccaggaagtgactgtgaattctgaaggagcaggagttcaggggaaagtc
tgggccaatgttacagggccttctgggaaacctgtcaccagcaaggtggaggcaggtctt
aaaccagagaccagtcaagtgaagtttatcccttgggaggcagggccataccaggtggag
ctgacctttgacggagctccgatcccaggatcccccttcaaccccaccgcctatcccccc
accgacgccaccaaggtgaagtgttccggcccaggtttggagcatgccaaagtgggagag
actggggagtttgtggtggactgtaccaacgcaggtccagctgagctgaccatagagatc
atcagtgatggcgggacagaggcagaggtccacatccaggataatggagacggaacctac
accatcacctacatcccccggtaccccggctcctacaccctcaccatccgctatgggggg
caggatgtacccaacttccctgcctgcctgactgtggagccggcgttcaacaccagcgga
gtccgcgtgttcggaccgggagtagagggcaaaggtgtgttccgcgaggcaaccacagac
ttcacggtagacgcgcggcccctgacccagatgggagggaagcacatcaagacagtcatc
cagaacccatctggagccgttactgaagctgtcatcaccgaccactgtgacggaacgtac
agcgtagagtacacaccctaccaagagggtccccacattgtagatgtggcctacgatgag
acaccagtacccaacagtccgttccatgttggcgtgacggaggggtgtgacccggggcgt
gtacgtgtgcatggacccggcctggacagaggcatcaccaacaaagccaatacattcaca
gtggagacccgtggtgcgggtacaggtggtctgggtctgggagtagacggcccgtcggag
gctaagatgtcctgcaacgacaacaaagatggcagctgcagtgtagagtacattccctac
gaggctggaacatataacctcaacatcacctacggaggacagcccattgctggcagtcca
ttccaggttcctgtcagtgacacagtggacagttctaaggttaagtgcatgggggagggg
cttggaaccaacgtgcgtgccaacattccacaggctttctccgtggacacctctaaagca
ggagtcgcccctctacaagtcagagtacaaggacccaaaggtgtagtggagacagcagag
ttagtggacaatggagaccagacttacacagtgaactacatcccgaccagagagggacct
tactctatcaatgtactgtatgctgaccaagagatcccacgcagtccctacacggtgcag
gtgttgcctacccatgatgccagtaaggtgcacgccagcggtcccggtctcaacaccact
ggagtgcccgcctctctgcctgtcgagttcaccatcgacgtcaaggatgcaggaatgggg
ctgcttgctgtgcagatcactgacccagaggggaagcctaagaaggccagtgtctgtgac
aaccaggacgggacctatctggtatcatatgtacctgacatggtgggtcgttacaccgtg
ctgataaagtatggaggggacgagatcccttactccccctaccacgtcagggctctacct
aatggagacgccagcaagtgtatcgtcacaggggctggtgtgggtacggccatccagagt
ggcgagcagaccgtcatcactgtgaatgcaaaggctgctggaaaaggaaaggtgacgtgc
agtgtgtgtgcctcagaaggggtggagttagatgtagacgtgatggagaatgaggatgga
acctttgatatcttctacactgccccccagcctggagattactgtatctgcgttcgcttt
ggaggggaactcatccccaacagccccttcctggtcacggcattggaaggagccccctca
gatcagctcctccaacaagaacaactaccacaatactacagtcaacaaccctcggcatca
gaccagccaatgcgaacgaacggtttggatgttgtgggactccggccgtttgatctgatc
atccccttcaccatccagaatggagagatcacaggtgatgtgcgcatgccgtcaggtaag
acagccaagccagacatcacagacaataaggacgggacagtaacggttaaatatgctcca
actgaggtcggcctgcacgagatggacatcaaatacgacgggatacacatccctggtagt
ccactccagttctatgtggactatgtgaacagcgggaacgtcagtgcatacggaccgggc
cttatccacgggaccgtcaacaaacctgccatgttcaccgtcaacaccaaggatgcagga
gagggtggtctgtcgctggccatggacggtccttctaaagccgacatcagctgtgtggat
aaccaggatggaacatgctctgtgtcctacctgcctgtcctacctggacagtacagcatc
ctggtcaaatacaatgacaaacacatccctggcagccccttctcagcctgcatcacaggt
gatgactctatgagggtgtcccatctgaaggtgggctctgctgctgacatcccattggac
attggagagctggacctgagtcagctgactgcttctctgaccacgccctcaggccaggag
gaaccctgccatctcaagatgctccgcaatggacacgtcggcatctcatttgttcccacg
gagattggagagcacctggtgaacatcaagaaaaacagacaccatattcccagcagcccc
atcactgtgatgataagccaatcagttattggcgacgccagcctggtgcgtgtgactggc
cagggcctcagcgaggccaaaaccttcgaatccgctgagttcatcatcgacacacgcaaa
gcaggctatgggtgtctgagtctgtccatcgagggccccagtaaggtggacattaacact
gaggaccaggaggatggcacctgtaaggtcacctactgccctactgaaccaggaagctac
atcatcaacatcaagttcactgaccagcacgtaccagggagtgcgttcacggtgaaggtg
acaggagaagggaggatgaaggagagcatcaccaggaagaagagggcagcgtctgttgca
aacattggcagccagtgtgacctcagcctcaagatcccagagatcagcataacagacatg
atggcccaggtgaccagtccatctggtcaggtccaggaggctgacatcatggagggagag
aacaacacctactgcatccgctttgttcccacggagaccggcgtacacacagtgtgtgtg
aagtatgcaggcgtgcacgtgcccggcagccccttccagttcacagtggggccccttgga
gaaggaggagcccacaaggtccgcgctggggggcccgggctggagagggcagaggctgga
gtaccagctgagttcagtatctggacgcgggaggcaggtgcagggggtctcagcatcatg
gtggaggggcccagtaaagcagagatcaccttcgaggaccgcaaggacggatccagtgga
gtatcctacatggtccaggagtcaggaaactatgaggtgtctgtccgtttcaacgaagag
cacatccctgacagtcccttcgtggttcccgtggcgtcgccctctgatgacgccagacga
ctcactgttgccggtcttcaggagtccgggttgaaggtcaatcacccagcatcctttgct
gtgagcctgaacggagcgaagggacagattgacgctaaagtccacagcccctccggagcc
ctggagggctgctgtgttactgagctagaccaagataaatatgctgtgatgttcattccc
agagagaacggtctgtatctgatcgatgtgaagttcaacggcagccacatccctgacagc
cctttcaaaatcagagtgggggagacgggaaaggctggagacccaggcatggtgaccgca
tacggagctggattagagggaggaaccactggtatagcctgtgagttcgtggttaacacc
agtacagcaggacccggggccctggcggtgaccattgacggcccctccaaggggaaggtg
gactgtgttgagtgtccggagggttacaaggtgacctacacccccatggctccaggaaac
tacttcatctccatcagatacggaggaccttaccacatcgtaggatcccccttcaaggcc
aagatcactggctccaagcgggtcagtagccatagcaaccatgagacgtccagcgtcatg
gtcgatgatatgactcgccatgtcagctactcccaccagggagctcccagccaatcggac
gccagctgtgtgacagccaaggggctcggtctatcaaagggtttcatcgaccagaagaac
aacttcagcgtcgactgcagcaaagcaggtcgtaacatgctgttggtgggtgtggacggg
cccagggttccctgtgaggaagttctagtgaagcatcttgggaaccgtgtctatcacgtc
agctaccagctcaaggagaagggagagtacatcctggtagtgaagtggggagaacaacac
atccctgggagcccgtaccatatcattgtctag
DBGET
integrated database retrieval system
