Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139417046
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Entry
139417046 CDS
T10872
Name
(RefSeq) LOW QUALITY PROTEIN: synaptic vesicular amine transporter-like
KO
K08155
MFS transporter, DHA1 family, solute carrier family 18 (vesicular amine transporter), member 1/2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
139417046
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocla02000
]
139417046
Transporters [BR:
ocla02000
]
Solute carrier family (SLC)
SLC18: Vesicular amine transporter
139417046
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-1 (12 spanner) (DHA1) family [TC:
2.A.1.2
]
139417046
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
S_4TM
Motif
Other DBs
NCBI-GeneID:
139417046
NCBI-ProteinID:
XP_071022384
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All DBs
Position
1:67679655..67697998
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AA seq
568 aa
AA seq
DB search
MTSRSIQVTKTPRIYRSFRICGRKGIFANVHLRPNIFSLAPLWTLKMGRLDTLREFNLLL
WMREERQSRKLILVIVFIALLLDNMLLTVVVPIIPSYLYTIDDAAANMAKNHTTASPHTP
SGTFQTIVSLYDNSVRVTSGDPMDSTPIPLGQTQGVSSSTSALTPHNSTQPDCPKADDQL
LNENVKVGLLFASKATVQLITNPFIGPLTNRIGYQIPMFAGFCIMFLSTIMFAFSSSYTL
LFLARSMQGVGSSCSSVAGMGMLASVYTDDEERGNAIGIALGGLAMGVLVGPPFGSVMYE
FVGKTAPFLILAVLAVLDGALQLFILQPSKVEPESQKGSSLWSLMKDPYILIAAGSICFA
NMAIAMLEPALPIWMMETMCPRKWQLGIAFVPASISYLIGTNIFGVLAHKMGRWLCALIG
MVLVGVSILCVPFAKDIYGLILPNFGVGFAIGMVDSSMMPIMGYLVDLRHVSVYGTVYAI
ADVAFCMGFALGPSAGGAIAKSIGFSWLMTIIGVVDILFAPLCYFLRSPPGREEKMAILM
DSNCAMKTRSYSTQGNTEYEEMETEYDE
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcaaggagcattcaagtaactaaaacgccccgcatctatcgttcctttcggatt
tgcggccgcaaagggatttttgctaatgtgcatctaagaccgaatattttttcacttgct
cctttgtggactctaaaaatgggaagattagacacactgagagaatttaatttattgtta
tggatgagagaggaaagacaatcgaggaagttgatcctggtcatcgttttcatcgccttg
ctgctggataatatgcttctaacggtggtcgtccccatcatccctagctacctatacaca
attgatgatgcagcagccaacatggccaagaatcacactacggcctccccacacacccct
tctggaaccttccagaccatcgtgtccctctatgacaactctgtcagggtaaccagcggg
gacccaatggactccacacccatacccttgggtcagacgcagggggtctcttcttccacc
tcggctctcacaccccacaactccacacagcccgactgccccaaagcagacgaccagctg
ctcaatgagaatgtgaaagtgggactactctttgcctccaaggccactgtacagctcatc
accaaccccttcattgggcctctcaccaacagaataggataccagatccccatgtttgcc
gggttctgtattatgttcctgtcaaccatcatgttcgccttctcatcgagctacactctg
ctgtttctggccagatccatgcagggtgtgggctcctcctgctcctctgtggctgggatg
gggatgcttgccagtgtgtacacagatgatgaggagaggggaaatgccattgggatagcc
ctcggtggtctcgccatgggtgtgctggtgggcccaccatttggcagtgtcatgtatgag
tttgtggggaaaacggcacctttcctcattctggctgttctggctgtgctggatggagca
ctacaactgttcattctccagccctcaaaggtggaaccagagagccagaaagggtcttcg
ctatggagtcttatgaaagatccatacatactcattgctgcaggatccatttgttttgcg
aacatggccatcgccatgttagaaccagcgttgcctatttggatgatggagaccatgtgt
ccaagaaaatggcagctaggcattgccttcgtgccagccagcatctcttaccttattgga
accaacatctttggcgtcctcgcacacaagatggggagatggctgtgcgctctcatcggg
atggtcctcgtgggggttagcatcctctgtgttccttttgctaaggacatctacggacta
atacttccgaatttcggtgttggttttgcaattggcatggtggattcctctatgatgcca
atcatgggctacttagtggacctgagacacgtgtcagtctatggcactgtgtacgccatt
gctgatgtggcattctgcatgggctttgctttaggtccgtccgctgggggtgccatagcg
aagagcattgggttctcctggctcatgaccatcattggcgtcgtggacatcctcttcgct
cccctctgttacttcctcaggagtcctcctgggagggaggagaaaatggccatcttgatg
gactccaactgcgcaatgaagacccgatcatactcaacacaagggaacacagagtatgaa
gagatggagacagagtatgatgagtag
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