Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139417086
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Entry
139417086 CDS
T10872
Name
(RefSeq) actin-binding protein WASF3-like
KO
K06083
WAS protein family, member 3
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04520
Adherens junction
ocla05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
139417086
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
139417086
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocla04812
]
139417086
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
WASP / WAVE
139417086
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SCAR_helical
WH2
DUF5798
KIF21A_2nd
AhtL-like_1st
Motif
Other DBs
NCBI-GeneID:
139417086
NCBI-ProteinID:
XP_071022435
LinkDB
All DBs
Position
9:11057910..11172234
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AA seq
555 aa
AA seq
DB search
MPLVKRCIEPRHLCRGAVPDGVTSELECVTNSTLAAIIKQLGSLSRYAEDIFGDLFNEAN
SFYMRMNSLQERVDLLAVKVTQLDSTVEEVSLQDINMRKAFKSSTIQDQQVVSRTSVPNP
VVEMYHRGDKPPPLNILSPYRDDKKDALKFYTDPSYFFMLWREKMLQATEDKRKEKKRQK
TSCPAHCDQGRPHSRQAPPRSPLPSSEQQKQVEDPGREVKKVRKARNRRQEWNMMAYDKE
FRPDTRLTPSPYHGMSSEGSLSPDNRSMASDMGDHSYPASPNHPSQPTSAPHPIDGAPHL
TQAPQTQSLDRGGYPRANPPSGAAAAVRQIASLGRTQPPHQPPAQSEGGALNGPRQQSVK
DYRAHGGQPSTIPEYFIPPAPPPPPPIIPSAQTAFDSTSSSPLPPPSLPPPSLPPGAVAI
MSRSYSPSPPPPAPPAHYVPSPSHAPPAAPPPPPPGLPPSHILSPTHAIGGSQGEAPPTR
KGQMPMIPISDARSDLLAAIRRGIQLRKVQEQREQEAKREPVGNDVATILSRRIAVEYSE
SESDSGGEDNGEWSD
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgccgttggtaaagcgctgtatagagcccagacacctgtgtcgaggtgctgtacctgat
ggagtcaccagtgaactggagtgtgttaccaacagcaccctcgctgccatcatcaaacag
ctgggcagcctaagtcgttatgcagaggacatctttggggatctgttcaacgaagccaac
agcttctacatgagaatgaacagcctccaggagagagtggacctactggctgtcaaagtc
acacagctagactctaccgtggaagaagtgtctctgcaggatatcaacatgcgtaaggca
tttaagagcagtaccatccaggaccagcaggtggtgtcacggacctcagtccctaaccct
gttgtagagatgtaccaccgtggtgacaaacctccgcctctcaacatactcagcccttat
agagatgataagaaggatgcattgaagttctacacagacccctcctacttcttcatgctg
tggagagagaagatgcttcaggctacggaggacaaacggaaggagaagaaacggcagaag
accagctgtccagcccactgtgaccagggtagaccccacagcagacaggctccaccacgc
agcccactgcccagctccgagcagcagaaacaggtggaggatccgggcagagaggtgaag
aaggtgaggaaggccaggaatcgcagacaggagtggaatatgatggcctatgataaggag
ttccgcccggacacacgactcaccccctcaccctaccacggaatgtcctccgaggggtca
ttatcacctgataacaggtcgatggcatcagacatgggcgatcattcctaccctgccagc
cctaaccacccctcccagcccacctctgccccccaccccatcgatggtgccccccacctc
acccaagccccccagactcagtctctggacaggggagggtaccccagagccaaccccccc
tctggggcggccgccgccgtacgacaaatcgcatcactggggcgcacccagcccccccac
caaccccccgcccagtccgagggaggggcactcaacggtccacgtcagcagtccgtcaag
gactacagggctcatggcggccagccatccaccatcccggagtacttcatccccccagcc
cctccccctcctcccccaatcatcccctccgcccagactgccttcgactctacctcctcc
tcccccctccctcccccctccctccctcctccctccctcccccccggggctgtggccatc
atgtcccgttcttacagtccctcccctcctcctcccgccccccctgcccactatgtcccc
tccccctctcacgcccctcccgctgccccccctcctcccccaccaggcctgcccccatcc
cacatcctgtctccgactcacgctattggtgggtctcaaggagaagctccgcctaccagg
aagggccagatgcccatgattccgataagcgatgcccgcagcgacctgttggctgccata
cgtagaggtatccaattgaggaaggtacaggagcagagagagcaggaagcgaagagagag
cccgtaggaaacgacgtggccaccattctctcacgtcgcatcgccgtcgagtacagcgaa
tcagagtctgactccggcggggaggacaacggggagtggtccgactga
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