Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139417116
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Entry
139417116 CDS
T10872
Name
(RefSeq) ras and Rab interactor 2
KO
K17638
Ras and Rab interactor 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139417116
Membrane trafficking [BR:
ocla04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
139417116
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Gene cluster
GFIT
Motif
Pfam:
RIN1
VPS9
SH2
Motif
Other DBs
NCBI-GeneID:
139417116
NCBI-ProteinID:
XP_071022461
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Position
9:16484314..16515608
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AA seq
813 aa
AA seq
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MQGDLGSQRSFSVLDRLLHTHPVWLQLSINADSALYILLREPVGTFLVRKCSSSQRKLLC
VRVTADRAASSIKECLICEEDSTFALESSALSFPDLCRLVAFYCISRDVLPFPLELPEAI
AQASTHRKLEAISHMGLEFWSSLSDTQNGPGDLQAPPTIKASPITTKTPPTSAMQVKAGL
SQDLCYLLSRGRQESLCFINPLFLQLEQQQQPQQSIPGASHKRHRFKRSMRVRVSTESSM
TLSGCGGGAGSFPLPPPENPKDQERLQPTPLQPSPKPHRKVHPGAGVLRKTPALSPMSAE
DEDLVPVPPAAPTDPPVGEVEEDPSAPEEPSIEEACLALEGHPAPSLAQLDSSSSFSSLE
EEDPGAEAEDQFFKQPNPNPQHRPPLVRSRGGHGGLQRMSAAFVCFFAPEKRLARLVEEL
SRERRSAFGSLVQEFLQKQKEELRGVLTQAASSSSSSSPKSSLAVLQGLRCFLSQAKSFL
LDSGELSPPLETLVPDNEKDLALEKAMFGCVLKPLRVLLDQALLSLHRQDGSTQHLASSL
LACQEGAMERLGVLVGVPDTRGVERVRQKLGLMQRTHSPIDKVLLLLQVCKSVQKAMGAL
HDGGQEVSSEDFLPALSYVIVMCNTPQILLEVEYMMELLEPSWLTGEGGYYLTSVYASLC
LIQSPEAKGDQVPPGGLTREALDGLREWGRRRSLEAKSNRERQQNQRCVRVLFQDGERSA
VRTLQWRAGESSEALARLCASTFGVSEPQDYTLYWRSGGEMRTLPTQTQPQDLANHSEGG
PSLSYLRTDHDFSKMRRLTRGGAVDLGESVCEE
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgcagggggatctagggtcccagcggagtttcagtgtgttggaccgactcctccacaca
caccccgtctggctgcagctgtccatcaatgctgactccgccctctatatcctgctcaga
gaacctgtcgggacattcctggtgcgtaagtgcagctccagccagaggaagttgttgtgt
gtcagagtgaccgcagaccgagcagcatcctccattaaggagtgtctcatatgtgaggaa
gactccaccttcgccttggagagctccgccctcagcttcccagacctctgccgattggtg
gccttctactgcattagcagggatgtgctgccttttccattggagctcccagaagccatt
gctcaggcctccacccacaggaagctggaggccatctcccatatgggattagagttctgg
agttcactctctgacacccagaatggacctggggatctacaggctccacccaccatcaag
gcttcacccattaccaccaagactccgcccaccagtgccatgcaggtcaaggcgggtctg
tcccaggacctgtgttacttgctgtcccgcggcagacaggagtctctctgcttcattaac
cctctctttctccagcttgagcagcaacagcagccgcaacagtcgatcccgggggcgtcc
cacaaacgccaccgcttcaaacgcagcatgagggtccgtgtctctacagagagctccatg
actctgtctggttgtggagggggggctgggtcattccccttgcccccaccggagaacccc
aaggaccaggagaggctccagcccacacccctccagcccagtcccaaaccgcacagaaag
gtccatcctggggctggcgtcctgaggaaaacccctgcactgtcccccatgtcggccgag
gatgaggaccttgtgcctgtaccgccagcggctccaacagatcctccagtgggggaggta
gaggaggacccatctgctccagaggagcccagcatcgaagaggcgtgcttggccttggag
ggccacccagccccctctctggcccaactggacagcagcagctctttcagcagtctggag
gaagaggacccaggagcagaagcagaggaccagttcttcaaacaaccaaaccccaaccct
cagcaccgcccgcccctggtgcgctcgcgggggggtcacggaggcctgcagaggatgagc
gcggcgtttgtgtgtttctttgctccagagaagaggctcgccaggctggtggaggagcta
tcccgggaacggaggtctgcgtttggttccttggtccaggagttcctccagaagcagaaa
gaggagctgagaggggtcttgacccaggctgcctcttcatcgtcgtcttcctcgccgaag
tcctccttggcggtgctccaggggctgcggtgcttcttgtcccaggccaagagcttcctg
ctggacagcggagaactgtcgccccccctagagaccctggtgcccgacaacgagaaagac
ctagccctggagaaggccatgtttggctgtgtgctgaaacctctgagggtgctgctagac
caggccctcctctccctccacagacaggacggctccacccagcacctggcctctagtctc
ctggcctgccaagagggggcgatggaacgcctcggagtgctggtgggcgtgcccgacaca
cgcggagtggagagggtgaggcagaagctgggcctcatgcagcgcacccactcacccata
gacaaggtgctgctgctgctgcaggtctgcaagtcggtccagaaggccatgggggccctc
cacgacggtggacaggaagtgagctctgaggacttcctgccggcgctgtcctatgtgata
gtgatgtgtaacacgcctcagatcctactggaggtggagtacatgatggaactactagag
ccctcctggctcactggggagggtggctactacctgaccagtgtctatgccagcctctgt
ctgatccagagccctgaagcgaagggggaccaagtccccccaggaggtctgacccgcgag
gccctggacgggctgagggagtggggccgcagacgcagcctggaagccaagagcaaccgt
gagagacaacagaaccagaggtgtgttcgggtactgttccaggacggcgagcgcagcgct
gtgcggacgctgcagtggagagccggggagagcagcgaggccctagcccggctctgtgcc
tccaccttcggcgtctccgagccccaggactacaccctctactggaggtccgggggggag
atgaggacccttcccacccagacacagcctcaggacctggccaaccacagtgagggaggc
ccctctctctcctaccttcgcacggaccacgacttcagcaagatgcggcgcctgaccaga
gggggagctgtggacctgggggagtccgtgtgtgaggagtga
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