Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139417238
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Entry
139417238 CDS
T10872
Name
(RefSeq) transcription factor HES-5-like
KO
K06055
hairy and enhancer of split 5
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
139417238
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139417238
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
139417238
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GFIT
Motif
Pfam:
HLH
Hairy_orange
Motif
Other DBs
NCBI-GeneID:
139417238
NCBI-ProteinID:
XP_071022586
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Position
9:complement(43947106..43948125)
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AA seq
172 aa
AA seq
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MAPCSTNFSFQHLRFAEKDIKIRKPIVEKMRRDRINGCIEQLKLILEKEFHKQDPNTKLE
KADILEMTVSFLRQQLQPDPSQRDYGEGYSQCWRESLQFLSGSPKRDTTSIITSAGPLQG
LQQQLSTQVQRSIQQHPVVHSTSPVSSTLRPTTNTNTTLQDTGAKGPVWRPW
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atggctccctgttcaaccaacttctctttccagcacctgaggttcgcagaaaaagacatt
aagataaggaaacccatcgtggagaagatgcgtcgggatcgcatcaacggctgcatcgag
cagctcaagctcatcctggagaaggagttccacaaacaggaccccaacaccaagctggag
aaagccgacatcctggagatgaccgtgagcttcctgaggcagcagctgcagccggatcca
tctcagagggactacggcgagggttattcacagtgttggagggagtctctgcagttcctg
tccggaagccccaagagagacaccacttccatcatcacctcggctggacctcttcagggg
ctccagcagcagctctccacccaggtccagagatccatccagcagcacccagtggtccat
tccacctccccagtctcctccaccctccgacccaccactaacaccaacaccacgctccag
gacacaggagctaaaggcccagtctggaggccctggtag
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