Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139417259
Help
Entry
139417259 CDS
T10872
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-4b
KO
K04806
nicotinic acetylcholine receptor alpha-4
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04080
Neuroactive ligand-receptor interaction
ocla04082
Neuroactive ligand signaling
Brite
Ion channels [BR:
ocla04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
139417259
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
139417259
NCBI-ProteinID:
XP_071022618
LinkDB
All DBs
Position
9:47068896..47083202
Genome browser
AA seq
670 aa
AA seq
DB search
MNLSRCLRVLSALFFVHPSQVCPLGGPRVHAFRAAHAAEERLLKNLFARYNKLSRPVANT
SDVVLVHFGLSIAQLIDVDEKNQMMTTNVWVKQEWNDYKLRWNPEEYENVTSIRIPSEII
WRPDIVLYNNADGDFAVTHLTKAHLFYDGRIKWMPPAIYKSSCSIDVTFFPFDQQNCKMK
FGSWTYDRAKIDLISIASDVDQMDYWESGEWVIINAVGKYNTKKYECCTEIYPDITYYFI
IRRLPLFYTINLIIPCLLISCLTVLVFYLPSQCGEKITLCISVLLSLTVFLLLITEIIPS
TSLVIPLIGEYLLFTMIFVTLSIIITVFVLNVHHRSPRTHGMPHWVRRVFLDLVPRVLFM
KRPPATAKQNCLKLIEMMHRTSSSTAASQSQSFWAGVETGLGQLGQLGHTMPATPSDSSN
ILALSPSPSPSPTQGLPLEEHPIKAPQLFCRSPSSQYSILLEEPGKLGNTASPLSCSTHS
STPCSSPPSLPLGPLGPVHSLPRDEPQILSPNGRSHSVEHVFDHQRESNWEPPQRVGHRC
RSHSFQYCCLHEEGGGVAGGGKGREAVGEGRLKRQVLLDQLARASSTEPTVDLVIRETMV
HRISPSMRRAIEGVQYIADHLRAEDADFSVKEDWKYVAMVIDRIFLWMFVLVCILGTLGL
FLPPWLAGMI
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgaatctttccaggtgcttacgcgtgttgagcgcacttttcttcgtgcatccttctcaa
gtttgtcctcttggtggaccccgggtccatgctttccgtgctgcccatgccgctgaggag
aggcttctcaagaacctgtttgcccgctacaacaagctgtcccggcctgtggccaacacc
tccgatgtggtgctggtccactttggcctctccatcgcccagctcatcgacgtggatgag
aagaaccagatgatgacgaccaacgtctgggtgaaacaagagtggaatgattataaactc
cgctggaacccagaggagtacgagaatgtcacctccatccgcatcccgtcggaaatcatc
tggaggcctgatattgtgctttataacaacgctgatggtgacttcgcggtgacccacctg
accaaggcccacctgttctacgacggacgcatcaagtggatgccgccggccatctacaag
tcctcctgcagcattgacgtcaccttcttccccttcgaccagcagaactgcaagatgaag
tttggttcgtggacttacgaccgtgccaagatcgacttgatcagcatagccagtgatgtg
gaccagatggactactgggagagcggcgagtgggtgatcatcaacgctgtgggcaagtac
aacaccaagaagtacgagtgctgcaccgagatctaccccgacatcacctattacttcatc
atccgcaggctgccgctcttctacactatcaacctgattataccatgtctgttgatctcc
tgtctgactgtcttggtcttctatctgccctcccagtgtggcgagaagatcaccctgtgt
atctctgtgttgctgtctctcaccgtcttcctcttgctcattaccgagatcatcccgtcc
acctcgctggtcatcccgctcatcggcgagtacctcctcttcacaatgatctttgtcacc
ctatctatcatcatcaccgtctttgtgctcaacgtccaccaccgctcgccgcgcacccac
ggcatgccgcactgggtgcgccgggtcttcctggacctggtgcctcgtgtgcttttcatg
aagcggccaccggccaccgccaagcagaactgcctgaagctgattgagatgatgcaccgg
accagctcctcgacagcagccagtcagtcgcagtctttctgggccggggtggaaacgggg
ctaggacagcttggacagctgggacacacaatgcctgccaccccctctgacagctccaac
atcctggccctttccccttcaccatctccctctcctacccagggcctgcccttggaggag
caccccatcaaggccccccagctcttctgccgctccccttccagccagtactccatcctc
cttgaggagcctggcaagctcgggaacaccgcctcccctttgtcctgctcaacccactcc
tccactccatgctcttcccccccgtctctgccgctgggtcccctgggtccagtccactct
cttccccgggacgagccacaaatactgtcccccaacgggcggagccacagtgtagagcat
gtgtttgaccaccagagggagtctaactgggagcccccccaaagggtcgggcaccgctgc
cgctcccacagcttccagtactgctgcctgcacgaggaagggggtggggttgctggtggt
ggcaagggccgagaggctgtaggtgaaggaaggctaaagagacaggtcctgctagaccaa
ctagctagagcctcctccacagagcccactgttgacctagtgatccgggaaaccatggtc
cacagaatatccccgtcgatgagaagggccatagagggtgtgcagtacatcgctgaccac
ctcagggcagaggacgccgacttctcagtaaaggaggactggaagtatgtggccatggtc
attgacaggatatttctgtggatgtttgtactagtgtgtatactgggaacactgggacta
ttccttcctccttggctggctggaatgatctag
DBGET
integrated database retrieval system
