Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139417307
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Entry
139417307 CDS
T10872
Name
(RefSeq) U1 small nuclear ribonucleoprotein C-like
KO
K11095
U1 small nuclear ribonucleoprotein C
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139417307
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ocla03041
]
139417307
Spliceosome [BR:
ocla03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
139417307
Complex B
139417307
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-U1
Tle3_C
Motif
Other DBs
NCBI-GeneID:
139417307
NCBI-ProteinID:
XP_071022674
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All DBs
Position
9:complement(58259579..58262865)
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AA seq
157 aa
AA seq
DB search
MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDKTTAAFQQG
KMPPTPFPGAPPPGGAMIPPPNLNGPPRPGMLPTPQMGGPPMMPMMGGMGPPPPGMMGGP
GMRPPMGGRMQMMPGHHMMRPPGHPMMMRPMMARPDR
NT seq
474 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagttttattgtgattactgtgatacctaccttactcatgactcgccctctgtg
aggaaaacacactgcagtggccgcaaacacaaagaaaatgtaaaagactactaccagaaa
tggatggaagaacaagcacagagcctcattgacaaaacaaccgctgccttccaacaaggg
aagatgcccccaacaccattcccaggagccccacctccagggggtgccatgatccctcca
ccaaacctcaatggccccccacgtccagggatgctaccaacaccccagatgggtggtcct
ccaatgatgcccatgatgggtggaatgggaccacctccacctggaatgatgggtggtcca
ggtatgcgacctccaatgggtggccgaatgcagatgatgcctggacatcacatgatgcga
cctcccggtcacccaatgatgatgcggccaatgatggcacggccagaccgataa
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integrated database retrieval system
