Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139417341
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Entry
139417341 CDS
T10872
Name
(RefSeq) thyrotropin-releasing hormone receptor-like
KO
K04282
thyrotropin-releasing hormone receptor
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04020
Calcium signaling pathway
ocla04080
Neuroactive ligand-receptor interaction
ocla04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
139417341
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
139417341
04081 Hormone signaling
139417341
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ocla04030
]
139417341
G protein-coupled receptors [BR:
ocla04030
]
Rhodopsin family
Peptide
Thyrotropin-releasing hormone (TRH)
139417341
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7TM_GPCR_Srx
V1R
Motif
Other DBs
NCBI-GeneID:
139417341
NCBI-ProteinID:
XP_071022709
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Position
9:61824856..61826529
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AA seq
402 aa
AA seq
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MENTNDTSQDVINFTQNEVLINMPQNSMEVQVITIVLALLICGVGIAGNIMVVLVVLRTK
HMMTPTNCYLVSLAVADLVVLLAAGLPNISEVVDSWIYGYAGCLCITYLQYLGINVSSCS
ITAFTIERYIAICHSIKAQFICTVSRAKKIISFVWIFTSLYCMMWLFLVDTNETVYADGV
LVSCGYRVSRNLYMPIYFLDLSLFYVLPLIVAVVLYGLIARILFMSPLPTNLNSNSEGSI
HQGHSSSTVKVLGKTNKGAVTSRKQVTKMLAVVVIIFSLLWMPYRTLVVVNSFMDPPYLN
TWFLLFCRLCIYTNSAINPIIYNLMSQKFRASFKKLCKGKGLDPEKVTKYNVPVYYSVMK
DSSRESPEQTEQEDVSSYGDTGGKRINFTDKCGNTGTMFSVA
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggagaatactaatgacacctctcaagatgtcatcaatttcacacagaatgaagttctg
attaatatgccacagaactccatggaagtacaagttataacaattgttctcgcacttcta
atatgcggagttgggatagcggggaatataatggtggtgttggttgtgctgcgcaccaaa
cacatgatgacccctactaactgttatcttgtcagtctggctgttgcggaccttgtggtc
cttctagcggcaggtttacctaatatttcagaagtagtcgactcttggatatacggctac
gctgggtgcctttgcatcacatacctgcaatacctgggtatcaatgtatcatcctgctcc
atcacagccttcaccattgagcgctacattgctatctgccactccatcaaggcgcaattt
atttgcactgtgtctcgggcgaagaagatcatttcttttgtgtggattttcacctcgctt
tactgcatgatgtggttgtttttagtggacacgaacgaaaccgtctacgccgatggggtg
ttggtcagctgtggctaccgtgtctcaagaaacctctacatgccaatttactttctagac
ttatctttgttttatgtcctccctctgattgtggctgttgtgctgtacggtctcatcgca
aggattttattcatgagccccttgccaaccaatctcaacagcaatagtgaaggttctata
caccagggacactccagcagcacagtcaaggtgttgggcaaaacaaacaagggtgcagtg
acgtcaagaaaacaggttactaagatgcttgcagtggtggtgattattttctccctgctc
tggatgccataccggacgctcgtggtggtaaattctttcatggacccaccctacctaaac
acatggttcctgctcttctgccgcttatgcatctacaccaacagtgccatcaaccctatc
atttacaacctgatgtctcagaagttccgtgcctccttcaaaaagctttgcaagggcaaa
ggactagacccagagaaggttaccaagtacaatgtgccagtgtattacagtgtcatgaag
gactcttcccgtgagagccctgagcagacagagcaggaggatgtcagcagctatggggac
actggtggtaagaggatcaacttcacagataagtgtgggaacaccggcactatgttcagc
gttgcctga
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