Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139417363
Help
Entry
139417363 CDS
T10872
Name
(RefSeq) iroquois-class homeodomain protein IRX-3-like
KO
K24889
iroquois-class homeodomain protein IRX
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139417363
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
139417363
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
CD45
Motif
Other DBs
NCBI-GeneID:
139417363
NCBI-ProteinID:
XP_071022733
LinkDB
All DBs
Position
9:65041391..65042882
Genome browser
AA seq
326 aa
AA seq
DB search
MPASQTGNFFERNINMPPGYQIPYLGGPAGVQQQQAPYLAAMAGVPLTYSGLQGYNFIPY
SHHRYIANMNNSFDLKAVSPYHQALLGRGGPFYPQYRPGATDDLIRVAKVATRESTSALK
AWLNEHLKNPYPTKGEKIMLAIVTKMSLTQVSTWFANARRRLKKDNRVNWASKGKSDEEG
ESDEEEGEGSLQKPRLDEEDEIDPPTEDDNEDIGHRVSNSTTEPVDERLVKQSNDDNRAG
RLAAHAENVVKNDTEPKSFPANLESKDNVECQKPKIWSLAETATSETGKKPQYSACHPGT
QVGKFWAEWASRNGLYIPVYPAHDIL
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcgtcacaaacaggcaacttctttgagagaaatatcaacatgccccctggatat
cagataccgtatttgggaggtccagctggggtacaacagcaacaagccccttatcttgct
gcgatggctggggtacctttgacatattccggactacagggatacaacttcatcccctat
tcacaccacagatacattgcgaacatgaacaactctttcgacctgaaagctgtctctcca
tatcatcaagcgcttctcggccgaggaggtccattctacccgcaataccgaccaggcgca
accgatgacctgatcagggtcgccaaggtggctacccgggaaagcaccagcgcgctcaag
gcctggttgaacgagcatcttaagaacccgtatcccacgaagggtgagaagatcatgctt
gctattgtaaccaagatgagcctcacgcaggtttccacttggtttgccaacgccaggcga
cgactgaagaaggataatagggtaaactgggcgtccaaggggaaatctgacgaggagggc
gagagcgacgaagaggagggcgagggctctctgcagaaaccccgtttggacgaagaagat
gagatagatcctccaaccgaagatgacaatgaggatattggacatagagtatccaactca
acgacagagccggtggatgagcgccttgtgaaacagtcaaacgacgacaatagagctggt
aggctcgcggcgcacgcggaaaatgtggtaaagaatgacacagaacccaaatcatttcca
gctaatctggaaagtaaagataacgttgagtgtcaaaaacccaaaatatggtctttggca
gaaaccgcgacatcggaaacggggaaaaagccccagtacagtgcttgtcatcctggcaca
caagttggcaaattctgggcagaatgggcatcaaggaacggactgtacattcccgtatac
cctgctcacgatattctataa
DBGET
integrated database retrieval system
