Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139417366
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Entry
139417366 CDS
T10872
Name
(RefSeq) LOW QUALITY PROTEIN: sal-like protein 4
KO
K19871
sal-like protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139417366
03036 Chromosome and associated proteins [BR:
ocla03036
]
139417366
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
139417366
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
139417366
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-C2H2_jaz
zf-met
zf-C2H2_6
zf-C2H2_15
zf-C2HC_2
UBZ_FAAP20
zf-C2HE
B129_C2H2-zf
Zf-C2H2_ZNF451
zf-Di19
Motif
Other DBs
NCBI-GeneID:
139417366
NCBI-ProteinID:
XP_071022737
LinkDB
All DBs
Position
9:65609399..65617536
Genome browser
AA seq
1135 aa
AA seq
DB search
MRISTXGANFTTRRICKEGKKIVLLFVPDVCTMSRRKQAKPQQINSDDPGSSEKGVLQDG
QTEEIGNEVKRFRMDTAKVCTKCCAEFFNEAEFLEHQNNCTKSHEAVIVKDGEGREVPDS
PGDFQNDHRDYQPRSNCLSKSNAESMERMDDEEEPKINGAEQPPKQDQVEMSDSPRPEIS
HHQSQTSSKLQDSNVTLESMPGTKVAVTQHSSNVGLNNHRSAQTSQEALLAIPMILEQLV
ALQQQQIQQIHLTEQIRIQVAMMAPQSLHSAKGAAVDPLKALGAHLSQQLSAAAALISKR
TSRQSLSIESLKQGKLPQSNSNPTSLAGGLGPMPSKADMLKGLPDLANRLPVLLPQSPGS
KAFQSPFTGLSLGMDHSKKVKSKIPNMPESKNGSGCDSMYKHKCKYCGKTFGNDSGLQIH
LRSHTGERPFKCNICGNRFTTKGNLKVHFQRHKEKYPHIRMNPHPVPEHLDNIPTSSGIP
YGMSMPFEESNMVDMKPMLGIPSPGFHPSALQGFKPSFEGFRSDPFSQRPASSGSDGAFN
HEMGSDQHHQVSNELMGALHHMNGKDPPGDHEGSETAKLQQMVDGLEKRTNDPNECYICH
RVLSCQSSLKMHYRTHTGERPYKCKICGRAFSTKGNLKAHYSVHRANTPLKMQHSCPICQ
KKFTNAVVLQQHIRMHMGGQIPNTPMPETQLEASEEMNSPLPDEKSMDFNGFESMEDQYT
ELDSQEKPSKTSDSLPPSASEEPHQPHQAPQSSVFSSIAALENHMKNLTSSLNLQHQSST
ASESDGVPPKESTSASESLREQEYQSGRSPTVSDPVSFHSSSPVNSHVGSSKSKSPELAF
PEDYTRNRPRPDSDSGSQDASESNGALDLTAPSFTPKTIKEEPGLYFTNGEYAPSHLPPF
LRVPSSLVQLEMQIPPESSMGMSSLFGSQMPQGAGGQQRDSSSAPRRSSKQHLCNSCGKN
FSSASALQIHERTHTGEKPFGCTVCGRAFTTRGNLKVHVTTHMWNSSVRRGQRLSLDNPM
ALMAMSSESGNIMPPPKELDPQPMNFDQSLWNQYAAAFTNGLSMKTNEISVIQNGGMPGS
LAGGPLFHSTGGLMEMDGSHSGLPATMAEIEKNGSESVAKSQFPHFMEEGKIAVN
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatttctacttgaggagctaattttacaacccgaagaatttgtaaagaagggaag
aaaattgtgttactgtttgttcccgatgtttgcaccatgtcgaggcgtaagcaagctaaa
ccacagcaaattaattccgatgatcccggttcgtcagaaaagggggttctacaagatggt
caaactgaagagattggaaatgaggtgaagaggtttcgaatggacacagcgaaggtctgc
accaaatgctgtgctgaatttttcaacgaggctgaatttcttgaacatcagaataattgc
actaaaagtcacgaggcagtcatcgtgaaagatggcgaggggagagaagtaccagactcc
cctggtgacttccagaatgaccacagggactaccagcccagaagtaattgtctatcaaag
tccaatgcagagtctatggaaaggatggatgacgaggaagaacctaaaataaatggtgcg
gaacaaccacccaaacaagaccaggtagagatgtctgacagtcccaggcctgaaattagt
caccaccagagccagacctcatccaaactccaagattcaaatgtcaccttggagtccatg
cctggcaccaaagtggccgtcactcagcattcatcgaacgttggtttgaacaaccacagg
tctgcacagacatcccaggaggccttgctagccatccccatgatcctggaacagctggtg
gctcttcagcagcagcagatccaacagatccacctgactgagcagatccgtatccaggtg
gccatgatggctccacagagcctccactcggccaaaggggcagcagttgaccctcttaaa
gccctaggagctcacctctctcagcagctctctgctgcagcagccctgatcagtaagagg
actagccgccagagtctctcgatagagtccctcaaacagggcaaactaccccagtccaac
agcaaccccacctcactggctggaggactggggccaatgccctccaaagctgatatgttg
aaggggcttccagacctggccaaccgcctaccagtgttactgcctcaatcaccaggctcc
aaggcctttcaaagtcccttcactggcctctcgttagggatggatcactctaagaaagta
aagagcaagatcccaaacatgccagagtctaaaaacgggtctggttgcgacagcatgtac
aagcacaagtgtaagtactgtgggaaaacctttgggaacgacagcgggctccagatccat
ttgcgctcgcacactggagaaagaccatttaaatgtaacatctgcggaaaccgcttcaca
accaaaggaaaccttaaagtgcatttccagagacacaaggagaagtaccctcacatcagg
atgaacccacaccctgtgccagaacaccttgacaacattcccaccagcagcggcattccg
tatggcatgtcaatgccatttgaagaatccaacatggtggacatgaagccgatgcttggc
atcccatctccaggtttccacccatcagcactgcaggggttcaagccttcgtttgagggt
ttcaggagcgacccgttctcccaaagaccggcatcatcaggaagtgacggagcgttcaat
cacgaaatgggctctgatcagcaccaccaggtatctaacgagctaatgggagcgctgcat
cacatgaatggcaaagaccctcccggcgaccatgaaggctctgaaacggccaaattacag
cagatggtggatgggctggagaagaggaccaatgacccaaacgagtgctacatctgccac
agagtgctcagctgccaaagctccctgaagatgcattaccgtacacacacgggtgagcgg
ccctacaagtgtaagatctgcggccgtgccttctccaccaagggcaacctcaaagctcat
tacagtgtccatcgggccaacacgcccctcaagatgcaacactcctgccccatctgccag
aagaagttcaccaatgctgtggttctccagcagcacatccgcatgcacatgggaggccag
atccccaacacccccatgccagagactcagttagaggcctctgaagaaatgaactcccct
ctgcccgacgagaagtccatggacttcaacggctttgagagcatggaagaccaatacaca
gagcttgactctcaggagaagccaagcaaaacctcagattctctcccaccatctgcgtct
gaggaaccgcaccaaccccatcaggcccctcaatcctctgtgttctccagcatagcggca
ctggagaaccacatgaagaacctcacctcatctctcaacctgcagcaccaaagcagcacc
gcttcagagagcgatggagtgccccccaaagagtccacctcagcctccgagagcctccgg
gagcaagagtaccagagcggccgcagccccaccgtctcagaccctgtctccttccactcc
tcatccccagtcaacagccatgtgggaagcagcaagtcaaagtcccccgagttagccttc
cctgaggattacactcggaacaggcctagaccagactctgacagcggctctcaggatgcc
agtgagtccaatggggctctggacctgacggcacccagcttcaccccaaaaaccataaaa
gaagagcctggcctgtacttcactaatggagagtatgctcccagccatttgcctcctttc
ctgagggtgccctccagtctggtccaattggagatgcagattcccccagagagctccatg
ggcatgagctctctatttggctcccagatgccccagggagcaggagggcagcaaagggac
agctcaagtgctccccgtagatccagcaagcagcacctgtgtaactcctgtggcaaaaac
ttctcctctgccagtgccctgcagattcatgagaggacccacactggagagaagcccttc
ggctgcaccgtctgtggcagggccttcaccactagaggcaacctcaaggtgcatgttaca
actcacatgtggaacagctctgtgaggcgtggccagcgcctctctctggacaaccccatg
gccctgatggccatgagctcagagtctggcaacataatgccacctcccaaggaactggat
cctcagccaatgaacttcgaccagtctctgtggaaccagtatgctgctgctttcaccaac
ggcttgtccatgaagactaacgagatctctgtgatccaaaatggtggtatgcctggtagc
ctggccggtggtcctctgttccattcgactggaggcctgatggaaatggatgggtcccac
tctggcctgcctgccaccatggcagagattgagaagaatggctcagagagtgtggccaaa
tctcagttcccacatttcatggaggaagggaaaattgcagtgaactag
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