Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139417395
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Entry
139417395 CDS
T10872
Name
(RefSeq) TBC1 domain family member 22B-like
KO
K20360
TBC1 domain family member 2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139417395
Membrane trafficking [BR:
ocla04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
139417395
Retrieval pathways
139417395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
139417395
NCBI-ProteinID:
XP_071022766
LinkDB
All DBs
Position
9:72793924..72808200
Genome browser
AA seq
496 aa
AA seq
DB search
MATDNRIHFWRKNAKVPGRFPKDTPKANNLKSKKASSFHEFARSTNDAWDIDDEEDEDFL
APIHPSSLPPTVPSTHQVPPLPPQQPINTTIEPDTGPGPADRLAPPTAEVRLQHEEANGR
VVVKSSSEAQLKTNTVRSTLQKQQSLPVRPIIPLVARISDQNSSGAPIMTVRDKSRLDKF
KYLLSCPNTDLEELRKHSWSGIPREVRPITWRLLSGYLPVNMERRDLVLKRKRDEYFGFI
EQYYHSRTDETYKDTYRQIHIDIPRTNPLIPLFQQPAVQEVFERILFIWAIRHPASGYVQ
GINDLVTPFFVVFLSEFVEEDVENFDVASLPLDTQRNIEADSFWCMTKLLDGIQDNYTFA
QPGIQNKVKALEELVSRIDEDIHNYFKRYEVEYLQFAFRWMNNLLMRELPLRCTIRLWDT
YQAEQEGFSHFHLYVCAAFLIEWRKEILSMVDFQGLLMLLQNLPTIHWGNEEVGLLLAEA
YRLKYMFADAPNHYKR
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgataacagaattcatttctggaggaaaaacgcaaaggttccagggaggttt
cctaaagacactccaaaggcaaataatctcaagtccaaaaaggcgtctagtttccacgag
tttgcccgcagcacaaacgatgcctgggacatcgacgatgaggaggatgaggacttctta
gctcccatccatccctcatctctcccgcccaccgtgccctccacacaccaggtacctcct
cttcctccacaacaacccattaacaccaccattgagccagacacagggccagggcctgca
gaccggctggctcccccaacagcagaggtccgccttcagcatgaggaggccaatggcaga
gtggtggtgaagtccagcagtgaggcccagctcaaaaccaatacagtgcgttccactctg
cagaagcaacagtctctcccagtccgccccatcatcccgttagtcgccagaatctctgac
caaaattcatcgggggccccaatcatgacagtgcgagacaagagtcgattggacaaattc
aaataccttctgtcctgtcctaacaccgacctcgaggagctccggaagcacagctggtca
ggcattccacgagaagtgaggcccatcacatggaggctcctctctggttacctcccagtc
aacatggagcgcagagacctggtgctgaagaggaagagagatgagtactttggtttcatt
gaacagtattaccactccaggacagacgagacttacaaagacacatatagacagatccac
attgatattccgaggacaaacccactaattccacttttccagcagcctgcggtgcaagag
gtgtttgagaggatcctcttcatctgggctatccgccatccagccagcggctacgtccag
ggaatcaatgacttggtcactccattctttgtggtattcctttccgaatttgttgaggag
gatgtggagaattttgacgtagcgtccttgcctcttgacacccagaggaacattgaggca
gacagcttctggtgcatgaccaagctgctggacggaatacaggacaactacacttttgct
cagccagggatacagaacaaagttaaagctttggaagaattggtcagcagaatcgatgag
gacatacacaactactttaagaggtatgaggtggagtacctgcagtttgcttttcgttgg
atgaacaacctgctgatgagagagctgcctctacgctgcaccatacgcctctgggacacc
tatcaggctgaacaagagggcttctcccacttccacctctacgtctgtgctgctttcctg
atcgagtggcgcaaagagatcctctccatggtcgattttcagggtcttctcatgttactc
cagaaccttcctacaatccactgggggaacgaggaagtgggccttctcctggctgaagca
tacagactcaagtatatgttcgctgacgcgcccaatcactacaagagatag
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