Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139417436
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Entry
139417436 CDS
T10872
Name
(RefSeq) FYVE, RhoGEF and PH domain-containing protein 1-like
KO
K05720
FYVE, RhoGEF and PH domain containing 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
139417436
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GFIT
Motif
Pfam:
RhoGEF
PH
FYVE
SOS1_NGEF_PH
PH_11
FYVE_2
RHG20_PH
PH_alsin
PH_2
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
139417436
NCBI-ProteinID:
XP_071022820
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Position
9:78521435..78622764
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AA seq
1059 aa
AA seq
DB search
MQLNRPKSALVSSFSPSISPETAASTGSFSSQFKTMRFSYHISRSMARPQPPLRRIRPSS
SSPRLMTKSLSLEPGAHGACLGAHDDDSDTQTETPRLSSDPGPQTSGPLGLQPPGALLHP
ARHSCNRGDNGSGTPQEVPSTALKTRPPLPGPKPQVPPKPPHLQKSAGAARPRPRAPDKP
LPLPPPCRPLPADPRGGGASHPQTLPRVEGSSSPTACVLSLIEKFEREKIIVVPDITGGG
LCTPWVLETGPGGDTFSPPASELPLGCLPVVWPPGSSQDLQELRDLPQGLAVLVNVLPGE
TEVPEDDNDNELGTLCSISDKRMSMESGYSASERLTDTMEMREQVGSESESQSEIPSEHL
PLLQPQTDGKLANRDSGIDSISSPSHSEELCFAGDEDRVIYPCSPALTLPRLSSSSSSGY
AEGPGGERASAEGGRDSEGDSDLEEGSGDETIELINPMMDLLPLALPQTDRQDSTELSVQ
QRVFNIANELLHTEKAYVSRLYLLDQVFCSSLLEEARSRSSFPLDVVMGIFSNICSIYCF
HQQFLLPALEKRMAEWDVNPRIGDILQKLAPFLKMYGEYVKNFDRAMELVNTWMERSSQF
KAIVHQIQREERCGNLTLQHHMLEPVQRIPRYELLLKDYLHRLPDDHDDFQHAQKSLELI
ATAAEHSNTAIRKMERMRKLLKVYELLGGEEDIVNPTNELIKEGHILKLSAKNGTSQDRY
LILFNDRLLYCVPKLRLIGQKFGVRARINVDGMELKESSSVNVPRTFLVSGKQRSLELQA
RTEEEKKDWIQAIQATIQRHEQTLATFHHLNCSLRDEDYTPPNSPNCSELGKRAPTPIRE
KEVTLCMKCQEPFNSITKRRHHCKACGHVVCGKCSEFRARLLYDNNRANRVCIDCYTTLV
GVPPSPASLTCSINRRRSILEKQASVAAENSVMCSFLHHMEKGAGRGWQKAWFVIPENEP
LVLYIYGAPQDVKAQRSVPLIGFEVSLPESCDRLERRFAFKISQSHLTLYFSADGEELQR
RWIEVLSRAGRGEELQAHGSITEALEEEGEETATSGENT
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgcagttgaaccgaccgaagagcgctttagtgtcgagcttcagcccgtcgatttcccct
gagacggcagccagtaccggttccttctccagccagttcaaaaccatgcgcttctcctac
cacatcagccgcagcatggcaagaccacaaccgccgctgcgcaggatacgcccgtcctcc
tccagtcctcggctgatgactaagagcctatccctggagcctggtgctcacggtgcatgc
ctcggggcccacgacgacgactcagacacccagacagagacccctcgcctaagctcagac
cccggccctcaaacctcagggccactgggtctgcaaccccccggggccctgctgcacccc
gctcgacacagctgtaacagaggagacaatgggagtggaactcctcaagaagtgccctcc
accgccctcaagacacgccctcccttacctgggcctaaaccacaagtgcccccaaagcct
cctcacctgcagaagagtgctggtgctgctagaccacgcccccgcgccccggacaagccc
ctccctctgcctccgccctgtagacctctgcctgcagaccccagagggggaggagccagc
catccccaaacactcccccgcgttgagggaagctcttcccccaccgcatgcgtgctctcc
cttatcgagaagtttgagagggagaagatcattgtggtgcctgatatcacgggagggggt
ctctgcaccccctgggtcctcgagacgggaccaggaggggacaccttctctcccccagcc
tcagagctccctctgggctgtctccccgtggtctggccccctggttcctcgcaagacctc
caggagctccgggatctacctcaggggctggctgtgctggttaatgtgttgccgggggag
acggaggtaccagaggatgacaatgataatgaactaggaacgttgtgctctatctctgac
aagcgtatgtccatggagtctggctacagcgcctcggagagactcacggacaccatggag
atgagggagcaggtggggtcagaatcagagagccaatcagagatcccctctgaacacttg
cccctccttcagccgcagacggacggcaagctggccaatcgggactctggcatcgacagc
atcagctctccgtcccacagcgaggagctgtgtttcgccggcgacgaggaccgggtcatc
tacccatgtagtcccgccctcacgctgccacgcctctctagctcctcctcctccggctat
gccgagggtccggggggagagagggcgtcggccgagggggggagagattcggagggggac
agtgacttggaggaggggagtggggacgagacaattgaactgatcaaccccatgatggat
ctgctgcctttggccctgcctcaaacagacagacaggactctacagagctgtcggtgcag
cagcgtgtgttcaacatagccaatgagctcctccacacagagaaggcctacgtgtctcgg
ctgtacctcctggaccaggtgttctgctcctccctcctagaggaggcgcgctcccgctcc
tccttccctctagacgtggtcatgggtatcttctccaacatctgctctatatactgtttc
caccaacagttcctgctccccgccctggagaaacgcatggcggagtgggatgtgaacccg
cgcatcggggacatcctgcagaagctagcccccttcctgaagatgtacggagagtacgtg
aagaactttgaccgggccatggagctggtcaacacctggatggagaggtcgtcccagttc
aaagccatcgtccaccaaatccagagagaggagcgctgtggtaacctgaccctacagcac
cacatgttggagccggttcagaggatccctcgctacgagctgctgctgaaagactacctg
caccgtctccctgacgaccatgatgactttcaacatgcacagaaatcactagagttgatc
gccacagctgcagagcactccaacacagccatcagaaagatggagcgtatgcgtaagctg
ctgaaggtgtatgagttgctgggaggagaggaggacatcgttaaccctactaacgaactc
atcaaggagggacacatcctgaaactgtcggctaagaacggcacctcacaggacagatac
ctcatcctgttcaatgataggttattgtactgcgtccctaaactgaggctgattggccag
aagtttggggtgagagccaggatcaacgtggatgggatggagctgaaggagagcagcagt
gttaacgttcccaggaccttcttggtgtctggaaaacaacgatcactagaactacaggcc
aggactgaagaagagaagaaggactggatccaggctatccaggccaccattcagagacat
gaacagacgctagccacgttccaccatctcaactgctctctccgagatgaggactacact
cctcccaactcacctaattgttccgagctggggaagcgtgcccccactccgatccgtgag
aaggaggtgactctgtgtatgaagtgccaggagccgttcaactccatcaccaagagacgt
caccactgcaaggcctgtggacacgtggtgtgtggaaagtgttcagagttcagggcccgt
ctgctctacgacaacaacagggctaacagggtgtgcattgactgctacacaaccctagtg
ggggttcccccctcccccgccagcctgacctgcagcataaacagacgacggtcaatacta
gagaaacaggcgtcggtggcagcagaaaacagtgtgatgtgtagcttcctccaccacatg
gagaagggagcaggcagaggctggcagaaagcctggtttgtcatcccagagaatgaacca
ctggtgctgtacatatacggtgctcctcaggatgtgaaagcccagcgctctgtacccctg
attggcttcgaggtctcccttcctgagtcatgtgaccgcctggaacgccgctttgccttc
aaaatcagccaatcccaccttacgctctacttcagtgccgatggggaggagctacagcgc
cgctggatagaggtcctatcacgcgcagggagaggggaggagctacaggctcacggttca
attacagaggccctagaggaggaaggggaggagactgcaacctcgggagagaatacatga
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