Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139417566
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Entry
139417566 CDS
T10872
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3-like
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Enzymes [BR:
ocla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139417566
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
139417566
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GFIT
Other DBs
NCBI-GeneID:
139417566
NCBI-ProteinID:
XP_071022905
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Position
9:complement(50820556..50829216)
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AA seq
820 aa
AA seq
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MGPARPVPARRNSSPNRAYRGGRCTGQAPCYAVERTVSTVRVLSPVHYIPASAGLGCSHL
SSAARAYLLPRATRPPEPSASQDTPEPSASQEPPEPSAGQDPPEPSAGQDPPEPSAGQDP
PEPSAGQDPPEPSADQEPPEPPASPELPLSPELPLSPEALLSPVKGRDPSHLSHREKLQF
RGDGYEQPITMQIEGRHRRGRRRHHSQYPVSDCGTQTEQQSWEALRALGEGEGEGEGAGP
GLCAYASGPYYDHMTLPPELYAATGYLPSVAYNLEDINRIEYDDDPEMMTNQPNNRNCLI
GCCNTDNDEPSSFLSQSEYEGHWLDRPLNYLPLHELDSGLGCTDGSLHQGDLSDPETEEG
VEAPMSSPPGNTSRGSSPSSESLLSSELSDSGFHSVSTGEFRHFQKIIDGRIHNYRSRVV
PREQRSKSRWDLESIPETLTCDPQAGRAADGVHTAMTHQCTMGSSSIQFRKARSPQLSRH
GTGFAPRVAASSCRTEPCQRRALMLNQHSSEDLPSRSQTVHDLSDRRRASHPALPAGNTA
TGKYRHVNRQPPSSPNHLAVPTENSGTGQYNRGFNTDISEKRRCPLSDHVEGTWQGCVDN
HRSSMASEEYNSEKQGLSKSPSKKQRGKEPADWRQFATLGHPHIGGDWPQADCPCGPLYS
TLDGPSARSRRGLSGNPRAVRNQLLKARASRLADERSEVTTDEEARGEPWAGRYWNRTER
RRHLAWAREQRQRKLNRGAEGAGENGAGGTGVAGGLGGAGGPGGGCSTVLELSHRKQSRL
RNHKLLDDWTTVEELLTHGTRVGQGDNILGHSPLLSVTTV
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgggccctgcacgtcctgtgccagctcggcgtaacagttctccgaaccgtgcttaccgc
ggagggcgttgtactggtcaggcaccgtgttatgcggtggagcgcacggtgtccacagta
cgcgtgcttagcccggtgcactacatccccgcatctgctgggctagggtgctcccacctg
tccagcgccgccagagcctacctcctgcccagagccaccagaccgccagagccgtcagcc
agccaggacacgccagagccgtcagccagccaggagccgccagagccgtcagccggccag
gacccgccagagccgtcagccggccaggacccgccagagccgtcagctggccaggacccg
ccagagccgtcagccggccaggacccgccagagccgtcagccgaccaggagccgccagag
ccgccagccagtccggagctgcccctcagtccggagctgcccctgagtccagaggcgctc
ctcagtccagtcaaagggcgtgacccgtcccatctcagccaccgagagaagttgcagttc
cggggggacggctatgagcagccaatcactatgcagattgaggggagacaccggcgagga
agaaggcgtcatcactcccagtacccagtgtctgactgcggcacccagacggagcagcaa
tcctgggaggctctgagggccctaggggagggggagggggagggggagggggccgggcct
ggcctctgtgcctacgcttctggaccttactatgatcacatgacccttccaccagaactc
tatgcagccactggatacctccccagtgttgcctacaatctggaggacattaacaggata
gagtatgatgatgatccagagatgatgactaaccagcccaataacaggaactgtctgatt
ggctgctgtaacactgataatgatgagcctagcagcttcctgagccagagtgaatatgag
ggccactggctggacaggcctctgaattacctgcctctccacgagcttgacagcggcctg
ggctgcaccgacggcagcctccaccagggggacctgtctgacccagagacagaggagggg
gtagaggcccctatgtcctctcctccaggaaacaccagccggggaagctctccctcctct
gagtccctcctttcgtcagagctcagtgactctggcttccacagcgtcagcacaggggag
ttccgccacttccagaagattatagatgggaggatccacaactaccggagtcgcgtcgtg
ccccgggaacagagatcgaagtctcgctgggacctggagtccatccctgagaccctgacc
tgtgacccccaggctggtagagccgcagacggagttcacacagccatgacccaccagtgc
accatgggtagtagctccattcagttccgcaaagccaggagcccccagctgagcaggcat
ggcaccgggtttgctcctagggttgctgcctccagctgccgtacagaaccctgccagagg
agagcattgatgctgaaccagcactcttctgaggaccttcccagccgcagccaaactgtg
catgacttatcagacaggagacgggccagccacccagccctgcccgctgggaacactgcc
acagggaaatacagacacgtgaaccgacaaccgcccagcagcccaaaccacctagccgtg
cccactgagaactctggcacaggacaatacaacagggggttcaacacagacatcagtgag
aagaggagatgtccactgagtgaccatgtggaaggcacctggcaaggatgtgtggataac
cacagaagcagtatggccagtgaggaatataacagtgagaaacagggtctttccaagagt
ccatcaaagaaacagcgtgggaaggagccagcagactggcgtcagtttgcgacactggga
catcctcacattggtggggactggccccaagcagactgtccctgcggtcccctctatagc
acgctggatgggccctctgcccgctccaggaggggtctctctgggaatccccgggcggtg
aggaaccagctcctgaaggcacgggcctcccggctggctgacgagcggagtgaggtcacc
acggacgaggaggcccgcggggagccctgggcaggccgctactggaacaggacggagcgc
cggcgccacctggcgtgggcccgggagcagaggcagaggaagctgaaccgtggggctgag
ggggcaggggagaatggggctggaggtacaggggttgctgggggccttgggggtgcaggg
ggtcctggaggaggctgcagcacagtgctggagctcagccacaggaagcagagccgtctg
aggaaccataaactgctggatgactggaccacagtggaggagctgctgacccatgggaca
agggtggggcagggggacaacattctcggtcacagccctctattgtctgtcaccactgta
taa
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