Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139417626
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Entry
139417626 CDS
T10872
Name
(RefSeq) IQ motif and SEC7 domain-containing protein 1-like
KO
K12495
IQ motif and SEC7 domain-containing protein
Organism
ocla
Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
139417626
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139417626
Membrane trafficking [BR:
ocla04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
139417626
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec7
IQ_SEC7_PH
SOS1_NGEF_PH
PH_19
PH
RHG20_PH
PH_BUD3_C
Motif
Other DBs
NCBI-GeneID:
139417626
NCBI-ProteinID:
XP_071022935
LinkDB
All DBs
Position
9:complement(77188463..77281081)
Genome browser
AA seq
1519 aa
AA seq
DB search
MWCINCASDKTPAILHNNKLIYCVEETPRGDTGSFSDSTCSRGPYLSSSDHRYSSGPGPP
DPRSQHHPQGPPVAPPSPASLAWVQRTRYQPASLALRKQEEEDNKRCKALSDSYELSTDL
QDKKVEMLERKYGGYFLSRRAARTIQTAFRQYRMNKNFERLRSSASESRMTRRIILSNMR
LQYSFDDRQGQPQGQGQTQGQGQPQGQGQTQGQGQPQGQGQPQGQGGQRYPHPGRGQPGD
GEMEAGSPPLCQGDIEYTHLDETFSKQVKSLADSIDDVLTCQSGVEDFQEEEEEEEEGDG
GETGVVADDFGECVWRPREGDRQRGGGRGRGGERQSMHEDSIATSYSDVTLYIDDPSSPL
SLDRGPSSTDTEYWSPGVGGVGVGGREDSRDTEGGGSSNSRRSTPCTECRDYSLRGAHLP
LLTIDPPSDSSVDMSDRSDRGSIGRLVYETEPGGGGGGGGEGRSPHGTIKHNPHPNPHPN
PHPNPNGRSAPTHPQAQGQTRTVLPHRPHPSAIPSHLPYHTILHHHHQIPHHTQHPHHPY
PDTPSSSSQSPQGQPLTPLSSSSSTTLPPGGLEQVCCSDGDNDSLNSTTNSNDTINCSSG
SSSRDSLREPLPPLGKQTYQRESRQSWDSPAFNNDVVQRRQYRIGLNLFNKKPEKGIQYL
IERGFVSDTPVGIARFILERKGLSRQMIGEFLGCRQKQFNKDVLDCVVDELDFSGMDLDD
ALRKFQAQIKVQGEAQKVERLIEAFSQRYCVCNPVLIRQFQNPDTIFILAFAIILLNTDM
YSPNVKPEKKMKLEDFIKNLRGVDNGQDIPRDLLVGIYHRIEKWELRTNDDHVSQVQAVE
RVVVGKKPVLSLPHRRLVCCCQLYEVPDPNRSQRTGVHQREVFLFNDLLVVTKIFQKKKT
SVTYSFRQSFPLVEMQVHMFQNQHYPHGIRLTSANPGGERKVLIVLNAPSQQDRTRFTSD
LRESITEVTEMEKYRVESELEKQKGVVRPVVGGAGGGGLGSGLKGEAVNGTLGRPSLDDS
YASADGLKRTALSSSLRDLSDTGKRGRRNSVGSLDSTMEGSIISSPRPHQRPHMAGGVMP
PDSYDIQDYRPHRPILSPGMGVGGGPGLNHNTATGTTALGPSSGDRGGTGALGSGSGGGG
GSGGSFLGSLFGSKRASTKPPGPLPPLLPPGLPHYPAPVPPPTTGGPPPHSPSSLTHSDT
GGPSKIQALHAQYCYNSTAGQQPPPPYHHHHRYHAQAGPAPSQPSSTVQGAPGPHILHRG
PMVGVPKRPDPGPAPSHPQLQQLSQVQLAQLQQHGVQCVQGPGPVPSQGHGGCYTNMGVT
MGVGCPTPPLSPHPPRSPGPAPLTLYHTYSTHGRGRGGGGAKLPLTLSHSQPHPHAHTHA
PHRTALTHNHSPHPGLSLSPHPGLSLSPHPAQHPKHQTHFIFAAPPPQTPVARHIPQAAA
HGQYHPQYPPLSSIPPPPSHSPLPPPSSPNTPLTPISPYAHPLQHQGGQQGSGGGNSSTG
SGSTTSSKSKPINRISTVV
NT seq
4560 nt
NT seq
+upstream
nt +downstream
nt
atgtggtgcatcaattgcgcctcggacaagacccctgccattcttcataacaacaagctg
atatactgtgtggaagagactccacgtggagacacaggcagtttctccgacagcacctgt
agccgggggccctacttgagcagctctgatcaccgctacagcagtggccccggcccaccg
gacccccgatcccaacaccacccccagggccccccggtggccccccccagtcctgcctcc
ttggcctgggtccagaggacccggtatcagcctgccagcctggcgctccggaagcaggag
gaggaggacaacaagcgctgcaaagccctgtccgacagctatgagctctccacagaccta
caggacaagaaggtggagatgctggagaggaagtatggcggttacttcctgagtcggcgg
gcggcgcgcaccatccagacggcgttccgtcagtaccgcatgaacaagaactttgagcgg
ctgagaagctccgcctccgagagccggatgactcggcgcatcatcctgtccaacatgaga
ctgcagtactcgtttgacgaccggcagggccagccccagggacagggccagacccaggga
cagggccagccacagggacagggccagacccagggacagggccagccacagggacagggc
cagccccagggccaggggggacagaggtacccgcaccctggaagggggcagcctggggat
ggagagatggaggctgggtctcctccactgtgccagggggacatagagtacacacacctg
gatgagaccttctccaaacaggtgaagtccctggctgactccatcgatgacgtcttgacc
tgtcagtcaggcgtggaagactttcaggaggaggaggaagaggaggaggaaggtgacgga
ggcgagacaggggtggtggcggacgactttggagagtgtgtttggagaccgagggaggga
gacagacagaggggtggaggaagaggaagaggaggagagagacagagcatgcacgaggac
agcatagccacgtcctacagcgacgtgaccctctacattgatgacccctcctcgcccctg
tccctggaccgcggccccagcagcactgacacagaatactggagccctggagtgggtggc
gttggggtgggggggcgtgaagacagccgggacacagagggagggggcagcagtaacagc
cgacgcagcaccccctgtacagagtgtagagactacagcctgagaggagctcacctgccc
ctgctgaccatcgatccccctagcgacagctctgttgatatgagtgaccgctcggataga
ggttcgataggtagactggtctacgagacagagccagggggaggtgggggaggagggggg
gaagggaggtcgcctcacggcaccattaaacacaacccccacccaaacccccacccaaac
ccccaccccaaccccaacgggcgctctgcccccacacacccccaggcccaaggccagact
cgtactgtgctccctcaccgcccccacccctcggccataccctcccacctgccctaccac
accatcctacaccaccaccatcagatcccgcaccacacccagcacccccaccacccgtac
cccgacactccctcttcgtcctcccagtccccgcagggacaacccctcacccctctgtct
tcctcctcatccaccacactgccccctggtggcctggagcaggtatgctgttcggatgga
gacaacgactctctcaactccaccaccaactctaacgataccatcaactgctcctccggg
tcctcatcacgcgacagcctccgggagcccctcccaccgctcgggaaacagacctatcag
agagagagcagacaaagctgggatagccccgcctttaacaatgacgtggtgcagagacga
cagtaccgcatcggactcaatctattcaacaagaagccagagaagggtatacagtacctg
atagagagaggcttcgtatcggacacaccggtaggcatcgcccgcttcatcctggagagg
aaaggactgagcagacagatgataggagagttccttggctgcagacagaaacagttcaac
aaggacgtactagattgtgtggtagatgagttggacttctcagggatggatctagatgat
gccctcaggaagttccaggctcagattaaagtccagggggaggcccagaaggtggagaga
ctgatcgaggctttcagtcagcggtactgtgtgtgtaacccggtactgatccgacagttc
cagaaccctgacaccatcttcatcctggccttcgccatcatcctcctcaacacagacatg
tactctcccaacgtcaagccggagaagaagatgaagttggaggatttcatcaaaaacctc
agaggagtggataatggtcaggacattcccagagacctgttagtaggaatctaccatcgg
atagagaagtgggagctacgcaccaacgatgaccacgtgtctcaagtgcaggctgtggag
agggtggtcgtcggcaagaagcccgtgctctcgctgccacaccgcagattggtgtgttgc
tgtcagctttacgaggtgcctgaccctaacagaagccagaggactggagtccaccagaga
gaagtcttcctcttcaacgacctgctcgtggtaaccaagatcttccagaagaagaagacc
tctgtgacatacagcttcagacagtccttccccctggtcgagatgcaggtccacatgttc
cagaaccagcactatccccacggtatccgtctgacgtcggccaatcctggcggggagagg
aaggttctgattgtattaaatgctccaagtcagcaggacagaacacgcttcacctccgac
ctgagagagagcatcactgaggtgacggagatggagaaatacagggtggagtcggagttg
gagaagcagaaaggggtggtgagacctgttgtgggcggggctggcggtggtggtctgggc
agtggcttgaagggcgaggcggtgaatggcactctgggtagacccagtctggatgacagc
tatgcttccgcagacggactcaaacgtaccgcgctcagctcatcactgagagacctatca
gacacagggaagcggggccgccgaaacagtgttggctccttggacagcacaatggaaggt
tccatcattagcagtcccaggcctcatcagcgcccccacatggctggaggtgtaatgcca
cccgacagctatgacatccaagattaccggcctcaccgccccatcctgagccccggaatg
ggggtggggggtgggccggggctaaatcacaataccgctactgggacgacggcactgggt
cccagcagcggagaccgaggggggacgggagccctggggagcgggtctggagggggaggg
ggcagtggaggctccttcctgggttccctgttcgggagcaagcgcgccagcaccaagccc
cctggtcctctcccccctctcctcccacctgggctgccacactaccctgcacctgtcccc
ccgcccaccactggcggcccgcccccacactccccctcctccctcacccactccgacaca
ggaggaccctccaaaatccaggccctgcacgcccaatattgctacaacagtaccgcaggg
cagcagcctcctccgccctaccaccaccaccaccgctaccacgcccaggcagggcccgct
cccagccagccctcctccaccgtccagggggcccctgggcctcatatcctccacaggggc
cccatggtaggggtccccaagaggccggaccccggtcccgctccctcccacccccagctc
caacagctgtcccaggttcagctggcccagctgcagcagcatggtgtacagtgtgtacag
ggccccggtcctgttccctcccagggtcacggagggtgctataccaacatgggggttact
atgggggtaggctgccccactccacccctttcacctcaccccccccgctcgccggggccc
gcaccccttaccctctaccacacatactccacacacggtcggggaagaggaggaggaggc
gccaagctccctcttactctctcacactcgcaaccccaccctcacgcccacacccacgcc
cctcatcgtaccgctcttacccacaaccacagcccccatcccggcctgtccctcagcccc
caccccggcctgtccctcagcccccatcccgctcaacaccccaagcaccagactcacttc
atcttcgctgccccgccgccccagacccccgtcgcccggcacatcccccaggccgccgcc
cacggccaataccaccctcaataccccccgctctcctccataccacctcccccttcgcac
tcccctttaccccccccttcctcccccaataccccacttacccctatctccccttacgcc
caccccctccagcaccagggagggcagcaggggtctggcgggggcaacagcagcacgggg
tcgggcagcaccaccagctccaagtccaagcctatcaaccgcatcagcacggtggtgtga
DBGET
integrated database retrieval system
