Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139417715
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Entry
139417715 CDS
T10872
Name
(RefSeq) ubiquitin-ribosomal protein eS31 fusion protein
KO
K02977
ubiquitin-small subunit ribosomal protein S27Ae
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03010
Ribosome
ocla04120
Ubiquitin mediated proteolysis
ocla04137
Mitophagy - animal
ocla04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
139417715
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
139417715
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
139417715
04137 Mitophagy - animal
139417715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
ocla03011
]
139417715
04121 Ubiquitin system [BR:
ocla04121
]
139417715
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ocla04147
]
139417715
Ribosome [BR:
ocla03011
]
Ribosomal proteins
Eukaryotes
Small subunit
139417715
Archaea
139417715
Ubiquitin system [BR:
ocla04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
139417715
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
139417715
Exosomal proteins of colorectal cancer cells
139417715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_S27
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
Dsc3_N
TBK1_ULD
Ubiquitin_5
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
139417715
NCBI-ProteinID:
XP_071022955
LinkDB
All DBs
Position
1:complement(77523066..77525743)
Genome browser
AA seq
156 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKIHRLRRE
CPADECGAGVFMASHFDRHYCGKCCLTYCFNKPEDK
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atgcagatttttgtcaaaaccctcacggggaagactataaccctcgaggttgagccttca
gataccattgaaaatgtcaaagctaagattcaagacaaagaaggtatccctcctgatcag
cagaggttgatcttcgctggtaagcagctggaggatggacgcacactgtctgactacaac
attcagaaggagtccactctgcacttggtgctgagactgcgtgggggtgccaagaagagg
aagaagaagtcctacaccactcccaagaagaacaagcacaagaggaagaaggtcaaactc
gcagttctcaagtactacaaggttgacgaaaacggcaagatccaccgtctgcgtcgtgag
tgcccagctgatgagtgtggcgctggcgtgttcatggccagccactttgataggcactac
tgtggaaagtgctgcctcacctactgtttcaacaagccagaggacaagtaa
DBGET
integrated database retrieval system
