Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139417906
Help
Entry
139417906 CDS
T10872
Name
(RefSeq) multidrug and toxin extrusion protein 1-like
KO
K03327
MATE family, multidrug and toxin extrusion protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocla02000
]
139417906
Transporters [BR:
ocla02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
139417906
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MatE
Glyco_hydro_31_2nd
Motif
Other DBs
NCBI-GeneID:
139417906
NCBI-ProteinID:
XP_071022993
LinkDB
All DBs
Position
10:999907..1043448
Genome browser
AA seq
593 aa
AA seq
DB search
MDNSKSNAVAVNVVNGHSKSDEASVTESTVESPVFCCGCLRRIRGWIPVHYKEEIGQILK
LAGPVVISQLMIFLVSFVSTVFCGHLGKTELAGVALAIAVINVTGLSIGSGLASACDTLI
SQTFGSGNMNRVGMILQRGVLILLLACFPCWALLINTEPILLAVKQSPEVARLSQLYVMI
FMPALPAAFMFLLQGKYLQNQGIIWPTVLVGVVGNILNALINYIFLYVLDLGVAGSAAAN
SISQYSLAVFLYCYIVWQGLHKATWEGWSADCLQEWGQFITLAIPSMLMLCLEWWTYEIG
GFLAGLISEVELGAQSVVYQLAVITYMFPLGFSVAASVRVGNALGAGNTEQAKLSGKVAS
ICAFIVSCFVSTFVLVTKDVMGYIFTTEQDIVKRVADIMILYGFFHLADTFVGVMGGVVR
GAGKQKIGALCNLVGYYFIGFPIGVSLMFPNKMGIIGLWIGLFTCVLIQSLFLVVLLCKL
DWKKASQEALVRAGVQLPEMKEEQFGLEKRGWSEAVPPSDESPGEGKTDVEGLGGDRGEG
GGELEAEAGPVVSTVRLTVRQLVLRRGLVVILMFLILTAGIILSELLTSLLLG
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggataattctaaatcaaatgctgtcgcggttaacgtagtgaacggacattctaaaagt
gatgaagcttcggtaaccgaatccaccgtagagtcacccgtgttttgctgcggctgtctg
aggcggatcagaggctggatccccgtgcattataaagaagagattggccaaattctgaaa
ctagcgggaccggtggttatatcccagctgatgatctttctggtcagttttgtcagcact
gtgttctgtggtcacctggggaagactgagctggctggggtggcactggctatagcggtg
atcaatgtcaccggcctctccattggctctggcctggcatcagcctgtgacactctcata
tctcagacatttggcagtggtaatatgaatcgtgttggcatgattctacaaaggggggtt
ctgattcttctcctggcctgcttcccctgctgggctctcctcatcaacactgaacccatc
ctattggctgttaaacagagcccggaggtcgccaggctctcccagctgtatgtgatgatc
ttcatgccagccttgccggctgccttcatgttcctgctgcaggggaaatatctgcagaat
cagggtatcatctggcctaccgtgctagtaggagtggtggggaacattctcaatgctctc
atcaactacatcttcctctatgtgctggacctgggcgtagctggttctgctgcagccaac
tccatctcccagtactccctggctgtctttctctactgctatattgtctggcagggtctg
cacaaggccacctgggaaggttggtcagctgactgcctgcaggagtggggtcagttcatc
acactggccatcccaagtatgctaatgctgtgtttggaatggtggacctatgagatcggc
ggtttcctggcaggtcttatcagtgaggtggagttgggggctcagtctgttgtctatcag
ctagctgtcatcacctacatgtttcctcttggattctcagtagcagccagtgtgagggtg
ggcaacgctctgggtgcagggaacacagaacaggccaagctgtctgggaaggttgcctcc
atctgtgcattcatcgtctcgtgttttgtcagtacgtttgtcctcgtgactaaagacgtg
atggggtacatctttaccacagagcaggacattgtgaagagggtggctgacatcatgatc
ctgtatggcttcttccatctggcagacaccttcgtgggcgtaatgggcggtgtcgtgcgt
ggagcaggaaagcagaagattggagcgttgtgtaatctggtggggtactacttcattggc
ttccccatcggagtctccctcatgttccctaacaagatgggcatcataggtttgtggata
ggcctattcacctgtgttttaatccagtccttgttcttggtagttctgctgtgtaaactg
gactggaaaaaagccagtcaagaggctctggtgagggcaggagtccagctccctgaaatg
aaagaagagcagtttggactggagaagagaggctggtcggaggcggtcccacccagcgac
gagagtcctggggagggaaagacggacgtggaggggctgggtggggacaggggggaaggc
gggggggagttagaggctgaggcggggccggtggtcagtacggtgaggttgactgtcaga
cagctggtgcttcgtcgtgggctagttgtcatcctcatgttcctcatcctcaccgctgga
atcatcctcagtgaactgctcaccagcctgctgctcggataa
DBGET
integrated database retrieval system
