Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139417925
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Entry
139417925 CDS
T10872
Name
(RefSeq) globoside alpha-1,3-N-acetylgalactosaminyltransferase 1-like
KO
K00722
globoside alpha-N-acetylgalactosaminyltransferase [EC:
2.4.1.88
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00603
Glycosphingolipid biosynthesis - globo and isoglobo series
ocla01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
139417925
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ocla01003
]
139417925
Enzymes [BR:
ocla01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.88 globoside alpha-N-acetylgalactosaminyltransferase
139417925
Glycosyltransferases [BR:
ocla01003
]
Glycan extension
FORS blood group (Forssman antigen)
139417925
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_6
Motif
Other DBs
NCBI-GeneID:
139417925
NCBI-ProteinID:
XP_071023019
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All DBs
Position
10:complement(4806061..4849072)
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AA seq
358 aa
AA seq
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MTSLQMVMVGRFLVFGNCCCTTASERMRGREHFQLSLVLAGGMAICWLVFSYCASVSLTQ
VNRQVVLNHRLQRKQAKLMEPVRTDVLTVTPWLAPIVWEGTFDPQVIDEVFMSQNLTIAT
TVFAVGRYTRFLRDFLESAEKHFMVGLEVHYYVFTDLPDDVPNNVTLGVGRLLSIVRVPK
FDRWQEISLRRMELIQTAIKDHIHRGAHYIFCLDVDMRFHGRVGPEALGRLVAAIHPWFY
MYPRSQFPYERRTVSTAYIPLDQGDFYYQANIFGGALEDVHRLTKTCREHLEVDKSVGVE
AVWQEESHLNWYLLRNKPTKLLSPEYVWDDAKGRDDKEIKLVRFSSVIKNKAEVRENL
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgacgagccttcagatggtgatggtggggagatttttagtcttcggcaactgttgctgt
accacagcaagtgagcgaatgaggggacgtgaacatttccaactttctttagtactggct
gggggaatggctatctgctggctcgtcttctcatactgtgcatccgtgtctctcacccag
gtgaatcgccaggttgtgctgaatcacagattacagcgcaagcaagccaaactcatggaa
ccggtgaggactgacgtgctgactgtaaccccgtggctggctcctatagtctgggaaggg
acttttgacccccaggtcatagacgaggtctttatgtcccaaaacctcaccatcgctacc
actgtgttcgctgtagggagatacactcgttttctccgggacttcttagagtcagctgag
aagcacttcatggtggggctggaggtgcattactacgtgttcaccgacctgcccgacgac
gtgcccaacaacgtgactctgggtgtcggcagactgctcagcattgtgagggtgccgaag
tttgaccgctggcaggagatatccctccgccgtatggagctcatccagactgccattaag
gatcacatccaccggggggcgcactacatattctgcctggacgtagacatgaggttccac
ggccgtgtgggtcccgaagctctggggagactggtggccgccatccacccctggttctac
atgtacccccggagccagttcccctacgagcggaggaccgtctccacagcctacataccc
ttggaccagggagacttctactaccaggccaacatattcggaggagcgttggaagatgtt
caccggctgaccaagacgtgcagggagcacctggaggttgataagtcagtgggcgtggag
gctgtgtggcaggaagagagtcacctgaattggtacctgttgaggaacaagcccaccaag
ctcctgtcaccggagtatgtttgggacgacgctaaaggacgggatgacaaggagataaaa
ctggtccgcttctcctctgtcattaagaacaaggcagaggtcagggagaacctctga
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integrated database retrieval system
