Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139417959
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Entry
139417959 CDS
T10872
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43-like
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
139417959
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocla04121
]
139417959
Enzymes [BR:
ocla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139417959
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
139417959
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
FANCL_C
Motif
Other DBs
NCBI-GeneID:
139417959
NCBI-ProteinID:
XP_071023085
LinkDB
All DBs
Position
10:complement(6268645..6491992)
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AA seq
860 aa
AA seq
DB search
MIVLQRRLAGLWPWLLMAALQVVFGQTGLELAAAVETERSALRAVIKVTLLRPEPTGKPI
TLEGLFVGGSAGSAEGKLMQSHPLSLCNTSEDERQESDFISIVKLESPERKVPQCLPLLH
KARLALERGAQAVIFDVTDDVNAKFQLHESDSLLRPVVLMQAEDAETLMELVNRNEEASV
RIDIKREDPKWAHYDVVVLLTIVLAILAIVSIFAFRYRCKSSRTWDSVHQQTMRAISRLE
TRMYSSQGCGGSQRHRGGWGSNSSSNSSPVCAICLDEFLDGQDLRIISCAHEFHKECVDP
WLLQHRTCPLCMHNIMGSELSGQPRRTRLQQTPEHSQGFLHTHPIPFSMRPHYPRGPSGP
YPSLGHYSGSPPLDPQTHRFLPSRPLGPGCGYLHPAEGPGRPHRAGGSCKTAGHPMETHY
GPGPRRSCHAYRSGCPSQRSASSSRLHHAPSSAPRASAGGAHSRGNEGGSCSGGSYRTEH
SGYLADGPASDSSSGPCHGSSSDSVLNCTDVSLQGVYGSWSTFRSSLSSDYDPFVYYGPG
PGPTGRRDSMEAGAQRPRSLDSVVNRDRGRGGGGRRGGCSEEQQQAVFSHVHYHRHRHHH
YREEGEREHAQGQGPGRGSDEELGATAFGRESGSPLALDKDSPVCPLKDSPCHCPKADHT
DSRGAHGHGTEGQGHDLSHPSGPPPVLVTPAPLPPPPTCCHQDHSHGGHHHRRAGRLGDC
VLDGPSVRFQQNLDLQDDCSIHIHYDQGYCCPPPDLPPALLSMPVPLILDSGGMRPLGGL
EDWPCCGGPHHVVWQKRVQQAHSEPQLLGPGLGVPMDITPPPSSRRHHGPHSPGDDHNTD
LCLYCQTLHNNQGSEEESGV
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atgatcgttctccagcggcgactggccgggctctggccgtggctgctcatggcggccctg
caggtggtgtttggccagacgggcctggagctggcggcggccgtcgagacggagcgctcg
gccctcagggctgtcatcaaggtgacactgctgagacccgagccaacggggaaacccatc
actctggaagggctgtttgtcggagggagcgccggctctgcagaggggaagctcatgcag
tcccaccctctgtccctgtgcaacaccagtgaagatgagcgccaggagtcagacttcatc
agcatcgtcaagctggagagcccggagcgcaaggtgcctcagtgtctgcccctgctccac
aaggctcgcctggcgctggagagaggggctcaggctgtcatctttgatgtcactgatgat
gtcaacgctaagttccagctgcatgagtcagattccctgctgcgtccggtggtgctgatg
caggctgaggatgctgagacgctgatggaactggtcaacaggaacgaggaggccagcgtc
cgcatcgacatcaagagggaggaccccaaatgggcccactatgatgttgttgtcctgctc
actatagtccttgctattctggccatcgtttcgatctttgctttccggtatcgatgcaag
tccagcagaacctgggactcagtccaccagcagacgatgcgagccatcagtcgtctggag
acgcgcatgtacagctctcagggctgcgggggctcacagcgccaccgtgggggctggggg
tctaatagcagctctaactccagccccgtctgtgccatctgtctggatgagttcctggat
ggacaggacctgaggatcatctcgtgtgctcatgagttccataaggagtgtgtggacccc
tggctactgcagcaccgcacctgtcccctctgcatgcacaacatcatgggttcagagctg
tctggacagccacggaggaccagactacagcagacccccgagcacagccagggtttcctc
cacacccaccccatccccttctccatgaggcctcactacccccgcggtccctctggtcca
tacccctccctgggccactatagcggctccccgcctctggacccccagactcaccgcttc
ctccctagtcggcccctgggccctggttgcggatacctccaccctgcagagggccccgga
aggccccacagagccgggggcagctgcaagacagcaggccaccctatggagacccactac
ggccccgggccccgccgctcctgccacgcataccgctccggctgcccttcccagcgcagc
gcttccagttccaggctccaccacgccccctcctctgctccccgcgcctccgcaggggga
gcccacagccgggggaacgaggggggcagctgctctggggggagctaccggacagagcac
agtggctacctggctgatgggccggccagtgactctagctctggcccctgtcacggctcc
tccagtgactcggtcctcaactgtactgacgtgtccctgcagggtgtgtatggtagctgg
tccacgttccgcagctccctgagcagtgactatgatccgtttgtgtactacgggccggga
ccgggaccgacaggccgcagggacagcatggaggcaggggcccagagacccaggtccctg
gactcagtggtgaacagagacagaggacgaggaggaggaggaagaagaggagggtgctct
gaggaacagcagcaagctgtgtttagccacgtccactaccaccgccaccgtcaccaccac
taccgagaggaaggggagagggagcacgcccagggccaggggccaggcagggggtcggac
gaggagctgggggctactgcttttggccgtgagtcaggatctcccctggctctggacaaa
gattccccagtatgccctctgaaagacagcccctgtcactgccctaaggcagaccacaca
gacagtagaggggcccatggccacgggacagagggtcagggccatgacctcagccacccc
tcaggcccccctccagtcctggtaaccccagcccccttaccacccccacccacctgctgt
caccaggaccacagccacgggggccaccaccaccggagggcgggccggctgggcgactgt
gtgctcgacggcccctcagtgcgtttccaacagaacctggacctgcaggacgactgtagc
atccacatccactatgaccagggttactgctgccccccgcccgacctgccccccgctctg
ctctccatgcctgtgcccctcatcctggactctggaggaatgaggcccctggggggccta
gaggactggccctgctgtggagggccccaccatgtggtgtggcagaagcgggtgcagcag
gcccactctgagccccagctgctggggcccgggcttggggtccctatggacataacccca
cccccatccagcaggcgccaccacggtccccacagcccaggggacgaccacaacacagac
ttatgtttatactgccaaacattacacaataatcagggatccgaggaggagtccggcgtg
tga
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