Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139417966
Help
Entry
139417966 CDS
T10872
Name
(RefSeq) sarcoplasmic/endoplasmic reticulum calcium ATPase 1-like
KO
K05853
P-type Ca2+ transporter type 2A [EC:
7.2.2.10
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04020
Calcium signaling pathway
ocla04148
Efferocytosis
ocla04260
Cardiac muscle contraction
ocla04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
139417966
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
139417966
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
139417966
04261 Adrenergic signaling in cardiomyocytes
139417966
Enzymes [BR:
ocla01000
]
7. Translocases
7.2 Catalysing the translocation of inorganic cations
7.2.2 Linked to the hydrolysis of a nucleoside triphosphate
7.2.2.10 P-type Ca2+ transporter
139417966
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
E1-E2_ATPase
Cation_ATPase_C
Cation_ATPase
Cation_ATPase_N
Hydrolase
Hydrolase_3
HAD
DUF3738
Motif
Other DBs
NCBI-GeneID:
139417966
NCBI-ProteinID:
XP_071023096
LinkDB
All DBs
Position
10:complement(7643004..7746437)
Genome browser
AA seq
1005 aa
AA seq
DB search
MDSAHTKSASEVLENFSVNENTGLTLEQVKSNFEKYGPNELPAEEGKSLWELVVEQFEDL
LVRILLLAACVSFVLALFEEGEETITAFVEPIVILLILIANAVIGVWQERNAENAIEALK
EYEPEIAKVYRMNRKAVQRVKAREIVPGDVVEIAVGDKVPADIRITSIKSTTLRVDQSIL
TGESVSVIKHTDPVPDPRAVNQDKKNMLFSGTNIAAGRAIGIVVSTGVSTEIGKIRNQMA
ATEQEKTPLQQKLDEFGEQLSKVISLICVAVWIINIGHFSDPVHGGSWMRGAIYYFKIAV
ALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQ
MSVCKMFVVEKVEDSSCAVHEFSITGSTYAPEGQVLKGDKVVQCGDYDGLLELATVCSMC
NDSSLDYNEVKGVYEKVGEATETALTTLVEKMNVFKTDVSGLSKVERAGACNSVIRQLMK
KEFTLEFSRDRKSMSVYCTPTNKTGSGCKMFIKGAPESVMERCQYLRVGTGKVALTMPLK
EQLTSLIRDWGTGRDTLRCLGMATRDSPPRQQDMDLENSTKFAEYETGLTFVGCVGMLDP
PRKEVIGSIQLCAEAGIRVIMITGDNKGTAVAICRRIGIFGEDEDVVGKAYTGREFDDLP
IDSQRDAVKRARCFARVEPAHKSKIVGFLQSFDEITAMTGDGVNDAPALKKAEIGIAMGS
GTAVAKSASEMVLSDDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAILG
LPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDKPPRNPKEPLISGWLFFRYLAIGG
YVGLGTVGAATWWYLFDDEGPHVSFYQLRHFMQCSEDNLMFQGIDCEVFESRFPTTMALS
VLVTIEMFNSLNSLSENQSMIRMPPWVNFWLLGAIFLSMSLHFLILYVEPLPLIFQVIPL
TWCQWIVVLKISFPVILLDEALKYISRNHLDDNDDKKYRNRQLKY
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atggatagcgcgcacacgaaatccgcatctgaagttttagagaacttcagtgtgaacgaa
aacactggactcacacttgaacaagtgaaatctaattttgaaaaatatggaccgaacgag
cttccggctgaagaaggcaagtccctatgggagctggtggtggagcagtttgaagacctc
ctggtcagaatcctgttgttagctgcctgcgtctcctttgtgctagctctgtttgaggag
ggggaggagaccatcacagccttcgtggaacctatcgtcatcctgcttatcctcatcgct
aacgctgtgatcggagtctggcaggagaggaatgcggagaacgccatcgaggcgctgaag
gagtacgagccagagatagccaaagtgtaccgcatgaaccgcaaggctgtccagagggtc
aaagcccgggaaatcgtgcctggggatgttgtagagattgcggttggtgacaaggtccct
gctgacatcaggatcacctccattaaatctaccaccctaagagtggaccagtctattcta
acaggcgaatctgtgtcagtgatcaaacacaccgaccccgtccctgaccccagagctgtc
aatcaagacaagaagaacatgctgttttctggcaccaacatcgctgcggggcgagccatc
ggcatcgtggtctccactggtgtatccacagagatcggtaagatcaggaaccagatggca
gccacggagcaggagaagacccccctgcagcagaaactggacgagttcggggagcagctc
tccaaggtcatctccctgatctgcgtggccgtctggatcattaacatcggccattttagt
gacccggtccacggggggtcctggatgcgtggggccatctactacttcaagattgctgtg
gccctggctgtggctgccatccctgagggtctacctgctgtgatcaccacttgcctggcg
ctgggaacccgccgcatggccaagaagaacgccatcgtccgcagcctgccctcggtggag
accctgggctgcacctccgtcatctgctccgacaagaccggcaccctcaccactaaccag
atgtctgtctgcaagatgtttgtggtggagaaggtggaggattccagctgtgctgtccat
gagttctctataactggctcaacctacgcccctgaaggacaagtgctgaaaggggacaag
gtggtgcagtgtggagattatgatggacttctggagctggccactgtctgttccatgtgc
aacgattcttcactggactacaatgaggtcaaaggagtgtatgagaaggtgggtgaggcg
acagagacggccctcactacactggtggagaagatgaacgtgttcaagactgacgtgtca
ggcctcagcaaggtggagcgcgccggcgcctgcaactcagtgatcagacagctgatgaag
aaagagtttactctggagttctctcgggaccgcaagtccatgtctgtgtactgtaccccc
accaacaaaacaggctctgggtgcaagatgttcatcaagggtgccccagagagtgtgatg
gagcgttgccagtacctgcgtgttggcacagggaaggtggcgctgaccatgcccctgaaa
gagcagctcacctccctgatcagggactggggcacgggcagggacacgctgagatgcctg
ggcatggctacacgggactcgccacctagacaacaggacatggatctggagaactccacc
aagtttgctgagtatgagacgggcctaacgttcgttggctgtgtgggtatgctggacccg
cccaggaaggaggtgattggttccatccagctgtgcgccgaggctggcatccgtgtcatc
atgatcaccggggacaacaagggcacggccgtggccatctgccgacgcatcggtatcttc
ggcgaggatgaggatgtagtgggcaaggcctacacgggccgagagtttgatgacctgccc
atagactcccagagagacgctgtgaagagggcacggtgctttgcccgcgtggagcctgcc
cacaagtctaagattgtgggcttcctgcagtcgtttgatgagatcactgccatgactggt
gatggggtgaatgacgcgccagccctgaagaaggcagagattggcattgccatgggctcg
ggcacagctgtggcgaagtcagcatctgagatggttctgtctgacgataacttctctacc
atcgtggcggctgtggaggagggcagggccatctacaacaacatgaagcagttcatacga
tacctcatctcctccaacgtgggagaggtcgtctgcatctttttgacggccatcttgggt
cttcctgaggctctgatcccggtccagttgctgtgggtcaacctggtgacagatggtctc
cctgcgactgccctgggcttcaaccccccagacctggacatcatggacaagccgccccgc
aaccccaaggagcccctcatctctgggtggctgttcttcagatacctggccatcggaggg
tatgttggtctgggcacggtgggtgctgccacctggtggtacttgtttgatgatgaaggt
cctcacgtgtccttctaccagctgaggcactttatgcagtgctcggaggacaacctcatg
ttccagggcatcgactgtgaggtgttcgagtctcgtttccccaccaccatggccctgtcc
gtgctggtcaccatagagatgttcaactccctcaacagtctgtcagagaaccagtccatg
atcaggatgcctccgtgggtcaacttctggctgctgggagcaatattcctctccatgtcc
ctccacttcctcatcctctacgttgagccgttgcctctgatcttccaggtgatccctctg
acctggtgccagtggatcgtggtcctaaagatatcatttcctgtcatcctattggacgag
gccctcaagtacatctcccgcaaccacttagacgacaacgacgacaagaagtacaggaac
aggcagctaaaatattaa
DBGET
integrated database retrieval system
