Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139418019
Help
Entry
139418019 CDS
T10872
Name
(RefSeq) gamma-aminobutyric acid receptor subunit gamma-2 isoform X1
KO
K05186
gamma-aminobutyric acid receptor subunit gamma
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04080
Neuroactive ligand-receptor interaction
ocla04082
Neuroactive ligand signaling
ocla04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
139418019
04082 Neuroactive ligand signaling
139418019
04519 Cadherin signaling
139418019
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ocla04040
]
139418019
Ion channels [BR:
ocla04040
]
Ligand-gated channels
GABA-A
139418019
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
PH_24
Motif
Other DBs
NCBI-GeneID:
139418019
NCBI-ProteinID:
XP_071023203
LinkDB
All DBs
Position
10:complement(12582393..12648299)
Genome browser
AA seq
476 aa
AA seq
DB search
MVIIAPPNVASKCSKAMAKPSFSLKLFLWVFLLANLPTRSLQTENDDDVTNKTWVLTPKV
YESDVTNILNSLLDGYDNKLRPDIGVKPTVIHTDMFVNSIGPVNAINMEYTIDIFFAQTW
YDRRLKFNSTMKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRILYT
LRLTIDAECQLKLNNFPMDEHSCPLEFSSYGYPREEIVYKWKRSSVEVGDIRSWRLYQFS
FVGLRNTSEIVRTVSGDYVVLTVFFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAV
PARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALIEYGTLHYFVS
NRKPSTKKDKKKKNPLLRLFSSKQTPTVDIRPRSATAIQMNNATHMQERDEEYGYECLDG
KDCTSFFCCFEDCRSGAWRHGRLHIRVAKIDSYARIGFPTAFGLFNLVYWISYLYL
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggtgatcattgctcctccaaatgtagcatctaaatgctcgaaagcgatggcgaagcct
tccttctctctaaagctatttctttgggtgtttttactcgctaatcttcctacaagatcc
ctccagactgaaaatgacgatgatgtgacaaacaaaacgtgggtgttgactcccaaagtg
tacgagagcgatgtcaccaacatcctaaacagcctactggatggctacgataacaaactg
cgaccagatataggagtaaaaccaaccgtgatccacactgacatgtttgtcaacagtatt
ggcccagtgaatgctatcaatatggagtacaccatcgacatattttttgcccagacgtgg
tatgaccggaggttaaagttcaacagtaccatgaaggtcttgcgtctcaacagcaacatg
gtgggcaagatctggatccctgacaccttcttccgcaactccaagaaggccgacgcccac
tggatcaccacacccaatcgtatgctccggatctggaacgatggacggatactctacaca
ctgcggttgactattgatgccgagtgccagcttaaactgaacaacttcccaatggatgag
cactcctgtccgctggagttttccagctatggctaccccagagaggagatagtgtacaag
tggaagagaagctccgtggaggtgggagacatccgctcctggaggctctaccagttctcc
ttcgttggcctgaggaataccagcgagattgtcaggactgtgtcaggagattacgttgtg
ctgacagtcttcttcgacttgagcagaaggatgggttacttcaccattcagacctacatc
ccctgcactctcatcgttgttctctcctgggtctccttctggatcaacaaggatgctgtg
cctgctagaacatccttaggcatcaccactgtgctgaccatgactacgctgagtaccata
gccaggaagtcgctgcctaaggtgtcctacgtgacggccatggacctctttgtgtccgta
tgcttcatcttcgtctttgccgcgctgatagaatacggaacactgcattactttgtaagc
aacaggaagccaagcacaaaaaaggacaagaagaagaaaaacccgctcctccggctattt
tcctcaaagcagacccctacggtggacatacgccctcgctcagccaccgccatccagatg
aacaacgccacccacatgcaggagcgggatgaggagtatggctacgagtgcctggacggc
aaggactgcaccagcttcttctgctgtttcgaggactgccgctctggggcctggcggcac
gggcggttgcatatccgtgtcgccaagatagactcgtacgctcgcatcggtttccccacc
gctttcggtctctttaacctggtttactggatctcctatctctatctctag
DBGET
integrated database retrieval system
